RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 GABRB3P28472 473 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 VIPR1P32241 457 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 ABCG1P45844 678 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 PSMD8P48556 350 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 LIMK2P53671 638 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 ARHGEF7Q14155 803 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 CHI3L2Q15782 390 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 INSCQ1MX18 579 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 FAM46CQ5VWP2 391 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 MRNIPQ6NTE8 343 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 ERAP2Q6P179 960 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 FBXL19Q6PCT2 694 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 TRMT11Q7Z4G4 463 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 TMPRSS6Q8IU80 811 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 GPR150Q8NGU9 434 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 ATXN7L3BQ96GX2 97 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 NAF1Q96HR8 494 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 GABRG3Q99928 467 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 MCMBPQ9BTE3 642 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 FBXO6Q9NRD1 293 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 TAS2R1Q9NYW7 299 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 RNASEH1O60930 286 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 KLF8O95600 359 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 CD72P21854 359 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 MC4RP32245 332 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 RAP1GDS1P52306 607 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 MRPS21P82921 87 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 PEX6Q13608 980 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 TAF11Q15544 211 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 FASTKD1Q53R41 847 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 LDB1Q86U70 411 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 ZC3HC1Q86WB0 502 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 PNPLA1Q8N8W4 532 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 TXNDC5Q8NBS9 432 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 SLC13A1Q9BZW2 595 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 RSPH9Q9H1X1 276 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 DCDC2Q9UHG0 476 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 PRSS56P0CW18 603 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 ZNF30P17039 623 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 BPIP17213 487 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 XIAPP98170 497 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 SATB1Q01826 763 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 ZP2Q05996 745 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 STX3Q13277 289 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 STARD3Q14849 445 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 MLF2Q15773 248 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 FBXO43Q4G163 708 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 ZRANB3Q5FWF4 1079 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 DPPA4Q7L190 304 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 SDCCAG8Q86SQ7 713 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 NMUR2Q9GZQ4 415 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 RHOJQ9H4E5 214 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 PCMTD2Q9NV79 361 aa19.21■□□□□ 0.67
PDLIM2-204ENST00000397760 PLK4O00444 970 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 MAN2B1O00754 1011 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 ADAM23O75077 832 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 C1SP09871 688 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 OGNP20774 298 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 LEPRP48357 1165 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 CD151P48509 253 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 SEMA3AQ14563 771 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 NAA25Q14CX7 972 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 TSNAXIP1Q2TAA8 658 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 KIAA1211LQ6NV74 962 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 ERN2Q76MJ5 926 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 CBARPQ8N350 705 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 VPS39Q96JC1 886 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 C1orf21Q9H246 121 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 NDRG2Q9UN36 371 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 SLC30A1Q9Y6M5 507 aa19.2■□□□□ 0.66
PDLIM2-204ENST00000397760 MYO10Q9HD67 2058 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 F5P12259 2224 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 F8W8V4 182 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 ENTPD5O75356 428 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 S1PR4O95977 384 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 SERPINA6P08185 405 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 ADRB3P13945 408 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 HOXB2P14652 356 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 ACADSP16219 412 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 ATP6V1C1P21283 382 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 PMLP29590 882 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 MMP12P39900 470 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 STC1P52823 247 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 CCINQ13939 588 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 CST6Q15828 149 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 DNAL1Q4LDG9 190 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 ZNF789Q5FWF6 425 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 CNSTQ6PJW8 725 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 FAM151BQ6UXP7 276 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 GALNT7Q86SF2 657 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 DCLK2Q8N568 766 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 OR2T3Q8NH03 318 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 HDAC8Q9BY41 377 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 IL26Q9NPH9 171 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 APPL1Q9UKG1 709 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 ITM2BQ9Y287 266 aa19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 TCF20Q9UGU0 1960 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-204ENST00000397760 GOLGA8CPA6NN73 597 aa19.18■□□□□ 0.66
PDLIM2-204ENST00000397760 MID1O15344 667 aa19.18■□□□□ 0.66
PDLIM2-204ENST00000397760 SPAM1P38567 509 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms