RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PPM1FP49593 454 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 CSTF3Q12996 717 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TRIM25Q14258 630 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 LRRC14Q15048 493 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TRIM46Q7Z4K8 759 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ADAM32Q8TC27 787 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 DIS3LQ8TF46 1054 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 CCDC115Q96NT0 180 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 HHIPQ96QV1 700 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ECT2Q9H8V3 914 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 GPRC5BQ9NZH0 403 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 GPR34Q9UPC5 381 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 A0A1W2PP18 115 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TSPAN12O95859 305 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 FGBP02675 491 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 RPN2P04844 631 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 BGNP21810 368 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 AKT1P31749 480 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ERVK-21P61565 698 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 EMX2Q04743 252 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 SLC5A9Q2M3M2 681 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 LDLRAP1Q5SW96 308 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 METTL25Q8N6Q8 603 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 OSCP1Q8WVF1 389 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 RILPQ96NA2 401 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 FAM118BQ9BPY3 351 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 CCDC106Q9BWC9 280 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PCBD2Q9H0N5 130 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 FGF18O76093 207 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TMCC1O94876 653 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 MT-CYBP00156 380 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PABPC1P11940 636 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 GRIA1P42261 906 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 RHDQ02161 417 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 RELAQ04206 551 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 GAD2Q05329 585 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 NADSYN1Q6IA69 706 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 LARP4Q71RC2 724 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TMEM150AQ86TG1 271 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 WDR34Q96EX3 536 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 FCRL3Q96P31 734 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 CLK4Q9HAZ1 481 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 SLC7A8Q9UHI5 535 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PADI4Q9UM07 663 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 SYNDIG1LA6NDD5 238 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 B2RBV5 119 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 LINC00271P0C7V0 271 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ASMTP46597 345 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ZC3H12BQ5HYM0 836 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 RAP1GAP2Q684P5 730 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 C22orf39Q6P5X5 142 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TRMT11Q7Z4G4 463 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PNPT1Q8TCS8 783 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 IRF7Q92985 503 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 FAM131CQ96AQ9 280 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ZIC5Q96T25 663 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 CCSER2Q9H7U1 834 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PLK2Q9NYY3 685 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PKD2L2Q9NZM6 624 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 CCDC162PA2VCL2 907 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 CD1DP15813 335 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TRPC1P48995 793 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 EPHB1P54762 984 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 NFATC2Q13469 925 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PTK2BQ14289 1009 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TPGS1Q6ZTW0 290 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 KBTBD6Q86V97 674 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 L3MBTL4Q8NA19 623 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PCED1AQ9H1Q7 454 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TLR9Q9NR96 1032 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 SDK1Q7Z5N4 2213 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 AREL1O15033 823 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MSI1O43347 362 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 HOXC4P09017 264 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CCDC166P0CW27 439 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 NMBRP28336 390 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MZF1P28698 734 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CPOXP36551 454 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PEX6Q13608 980 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SIM2Q14190 667 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 FBXO43Q4G163 708 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 IL31Q6EBC2 164 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 RNF19BQ6ZMZ0 732 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PELI3Q8N2H9 469 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF184Q99676 751 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SPON2Q9BUD6 331 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SUV39H2Q9H5I1 410 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 IARS2Q9NSE4 1012 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ARMC1Q9NVT9 282 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 POLR3BQ9NW08 1133 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 THG1LQ9NWX6 298 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CPQQ9Y646 472 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PSMD12O00232 456 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 STK16O75716 305 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MBL2P11226 248 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 GPRC6AQ5T6X5 926 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PGBD3Q8N328 593 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 TRAM1L1Q8N609 369 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 TBATAQ96M53 351 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms