RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 EIF4EBP2Q13542 120 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 DNASE1L3Q13609 305 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 FAM110CQ1W6H9 321 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TYSND1Q2T9J0 566 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TECRLQ5HYJ1 363 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 SH3PXD2AQ5TCZ1 1133 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 Q6ZNX1 250 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 METTL23Q86XA0 190 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM192Q8IY95 271 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 FEM1CQ96JP0 617 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TBCDQ9BTW9 1192 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 CAB39LQ9H9S4 337 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 GIT1Q9Y2X7 761 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 RWDD3Q9Y3V2 267 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 RHOQP17081 205 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 PBX3P40426 434 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TUBA1BP68363 451 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF829Q3KNS6 432 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 NHSL2Q5HYW2 709 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TAPT1Q6NXT6 567 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TUBA1AQ71U36 451 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 LSMEM2Q8N112 164 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 CCDC185Q8N715 623 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 OR2T34Q8NGX1 318 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 OR2T3Q8NH03 318 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 DNAJB14Q8TBM8 379 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 C12orf43Q96C57 262 aaKnown RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 NXNL1Q96CM4 212 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 KATNBL1Q9H079 304 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 SMOC2Q9H3U7 446 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TFB2MQ9H5Q4 396 aaKnown RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 FBXO9Q9UK97 447 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 A3GALT2U3KPV4 340 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 WISP3O95389 354 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 SLC6A2P23975 617 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 SLC5A2P31639 672 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 SMARCB1Q12824 385 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 LCP2Q13094 533 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 IL18R1Q13478 541 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TP53BP2Q13625 1128 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 PYDC2Q56P42 97 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 CDKL4Q5MAI5 379 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 KBTBD8Q8NFY9 601 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 NARS2Q96I59 477 aaKnown RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TDRD1Q9BXT4 1180 aaKnown RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 EHD1Q9H4M9 534 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF395Q9H8N7 513 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 SP140LQ9H930 580 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ATP13A1Q9HD20 1204 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 GNPTGQ9UJJ9 305 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 NUDT5Q9UKK9 219 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 COL4A5P29400 1685 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 A0A1W2PPW3 197 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 CCDC162PA2VCL2 907 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 C5orf58C9J3I9 102 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 UBXN8O00124 270 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 HPRP00739 348 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 SBK3P0C264 359 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 CACNB2Q08289 660 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TGFBIQ15582 683 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ANKS6Q68DC2 871 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 SDE2Q6IQ49 451 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TXNDC11Q6PKC3 985 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 PHC3Q8NDX5 983 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 LPGAT1Q92604 370 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 SIPA1Q96FS4 1042 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 UGT2B28Q9BY64 529 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 PRRG3Q9BZD7 231 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 MPP6Q9NZW5 540 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 CRNNQ9UBG3 495 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 KCNU1A8MYU2 1149 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 STX16-NPEPL1H3BU86 382 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 STX16O14662 325 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 PMPCBO75439 489 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 NDST2P52849 883 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 PRKG2Q13237 762 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 CACHD1Q5VU97 1274 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ALG1LQ6GMV1 187 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 BBS7Q8IWZ6 715 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 LILRA2Q8N149 483 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 NKAPQ8N5F7 415 aaKnown RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 LRRC20Q8TCA0 184 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 KCTD4Q8WVF5 259 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ULBP1Q9BZM6 244 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 WDR70Q9NW82 654 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 KLHL42Q9P2K6 505 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 PORP16435 677 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 CCR1P32246 355 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 INHBEP58166 350 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 MADCAM1Q13477 382 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ANGPT1Q15389 498 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 TAB1Q15750 504 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ARHGAP36Q6ZRI8 547 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 PAQR9Q6ZVX9 377 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF605Q86T29 641 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 AMER2Q8N7J2 671 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 RTL3Q8N8U3 475 aaKnown RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 ZMIZ2Q8NF64 920 aa5.42□□□□□ -1.54
PTPRD-205ENST00000397611 PABPC5Q96DU9 382 aaKnown RBP5.42□□□□□ -1.54
PTPRD-205ENST00000397611 CPB2Q96IY4 423 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms