RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 DSC1Q08554 894 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 HSPA14Q0VDF9 509 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 ELAVL2Q12926 359 aaKnown RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 LIN52Q52LA3 116 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 RBM44Q6ZP01 1051 aaKnown RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 CNTN4Q8IWV2 1026 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 LILRA2Q8N149 483 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 RNF145Q96MT1 663 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 C17orf80Q9BSJ5 609 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 UNC93B1Q9H1C4 597 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 KLQ9UEF7 1012 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 SYCE1LA8MT33 242 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 CLDN11O75508 207 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 PEX11BO96011 259 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 LAMB3Q13751 1172 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 BTG3Q14201 252 aaPredicted RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 INPP5AQ14642 412 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 GSTA3Q16772 222 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZFP1Q6P2D0 407 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 LRRC43Q8N309 656 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 OR52B6Q8NGF0 335 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 FAM110BQ8TC76 370 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 GRIN3AQ8TCU5 1115 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 GATA6Q92908 595 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 CAPNS2Q96L46 248 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 KCTD14Q9BQ13 255 aaPredicted RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 CIPCQ9C0C6 399 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 MAGEH1Q9H213 219 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 CD84Q9UIB8 345 aa10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZNF638Q14966 1978 aaKnown RBP10.37□□□□□ -0.75
CPSF1P1-201ENST00000397477 KANSL1LA0AUZ9 987 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 CAPN1P07384 714 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 PSMA4P25789 261 aaKnown RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 CSKP41240 450 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 MAPKAPK2P49137 400 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 KPNA1P52294 538 aaPredicted RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 DGKQP52824 942 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 CDH15P55291 814 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 UFM1P61960 85 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 BOP1Q14137 746 aaKnown RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 MAP7Q14244 749 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 ATP6AP1LQ52LC2 224 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 GPRIN3Q6ZVF9 776 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 NPAS4Q8IUM7 802 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 MYLIPQ8WY64 445 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 MRPL40Q9NQ50 206 aaKnown RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 CPQQ9Y646 472 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 LOC285556D6RIA3 1793 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 A0A0G2JMZ2 1700 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 ANKRD66B4E2M5 251 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 TARM1B6A8C7 271 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 H3BNX3 289 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 ARVCFO00192 962 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 FBP2O00757 339 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 ALDH1A1P00352 501 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 ALDOCP09972 364 aaKnown RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 CDH4P55283 916 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 LCP2Q13094 533 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 CPSF6Q16630 551 aaKnown RBP eCLIP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 OR52E8Q6IFG1 317 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 FAM126BQ8IXS8 530 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 CATSPER1Q8NEC5 780 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 OR56A4Q8NGH8 313 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 FIG4Q92562 907 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 MPP4Q96JB8 637 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLC22A12Q96S37 553 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 SOX17Q9H6I2 414 aaPredicted RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 PCDHGA7Q9Y5G6 932 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 KNL1Q8NG31 2342 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 MKI67P46013 3256 aaKnown RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 MTX2O75431 263 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 SEC24AO95486 1093 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 PRAMEF1O95521 474 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 BMP1P13497 986 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 GABRR2P28476 465 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 RPL38P63173 70 aaKnown RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 CDKL1Q00532 357 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 BCL2L1Q07817 233 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 TRAF2Q12933 501 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 OFCC1Q8IZS5 231 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 MAGEE2Q8TD90 523 aaPredicted RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 BCL7CQ8WUZ0 217 aaPredicted RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 POLG2Q9UHN1 485 aa10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 POLR3HQ9Y535 204 aaPredicted RBP10.36□□□□□ -0.75
CPSF1P1-201ENST00000397477 A0A1B0GVM2 712 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 ZNF840PA6NDX5 716 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 STC2O76061 302 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 SLC25A14O95258 325 aaPredicted RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 PARNO95453 639 aaKnown RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 URODP06132 367 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 HOXC13P31276 330 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 MTPNP58546 118 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 HMGCS1Q01581 520 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 DEFB115Q30KQ5 88 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 DNAJB7Q7Z6W7 309 aaPredicted RBP10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 CBR4Q8N4T8 237 aa10.35□□□□□ -0.75
CPSF1P1-201ENST00000397477 FAM47BQ8NA70 645 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms