RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 BRAFP15056 766 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 CLCN5P51795 746 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 PPP2CBP62714 309 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 PPP2CAP67775 309 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 SFSWAPQ12872 951 aaKnown RBP21.02■□□□□ 0.95
CPNE1-204ENST00000397443 TJAP1Q5JTD0 557 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 RAPH1Q70E73 1250 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 CLDN19Q8N6F1 224 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 RLN3Q8WXF3 142 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 FAM131CQ96AQ9 280 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 CLDN23Q96B33 292 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 TTC1Q99614 292 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 MYOCQ99972 504 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 BTBD1Q9H0C5 482 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 VPS11Q9H270 941 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 CCDC68Q9H2F9 335 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 PLXNB3Q9ULL4 1909 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 PI15O43692 258 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 TOP3BO95985 862 aaKnown RBP21.01■□□□□ 0.95
CPNE1-204ENST00000397443 NR1D1P20393 614 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 AKT1P31749 480 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 PPARGP37231 505 aaPredicted RBP21.01■□□□□ 0.95
CPNE1-204ENST00000397443 GPR1P46091 355 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 SERPINB8P50452 374 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 ATP1A2P50993 1020 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 GYS2P54840 703 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 SLC12A2P55011 1212 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 TAS2R39P59534 338 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 RPS21P63220 83 aaKnown RBP21.01■□□□□ 0.95
CPNE1-204ENST00000397443 SIGLEC14Q08ET2 396 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 SGCGQ13326 291 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 FGL2Q14314 439 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 GPRC6AQ5T6X5 926 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 RNF187Q5TA31 235 aaPredicted RBP21.01■□□□□ 0.95
CPNE1-204ENST00000397443 HECTD2Q5U5R9 776 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 CERS6Q6ZMG9 384 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 CYP2U1Q7Z449 544 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 MTERF4Q7Z6M4 381 aaKnown RBP21.01■□□□□ 0.95
CPNE1-204ENST00000397443 GALNT7Q86SF2 657 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 CEP97Q8IW35 865 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 SPEM1Q8N4L4 309 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 FRMD1Q8N878 549 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 PLA2G15Q8NCC3 412 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 UHRF1Q96T88 793 aaPredicted RBP21.01■□□□□ 0.95
CPNE1-204ENST00000397443 OLFM1Q99784 485 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 CDH19Q9H159 772 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 ITM2CQ9NQX7 267 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 TTC28Q96AY4 2481 aa21.01■□□□□ 0.95
CPNE1-204ENST00000397443 PTGER3P43115 390 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 CDKN2DP55273 166 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 DET1Q7L5Y6 550 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 TRIM74Q86UV6 250 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 PIM3Q86V86 326 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 PHF6Q8IWS0 365 aaKnown RBP eCLIP21■□□□□ 0.95
CPNE1-204ENST00000397443 BIRC8Q96P09 236 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 COPS8Q99627 209 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 FZD3Q9NPG1 666 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 VPS9D1Q9Y2B5 631 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 PRSS21Q9Y6M0 314 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 TECTAO75443 2155 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 IQCF5A8MTL0 148 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 SLC31A1O15431 190 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 DNAJC6O75061 913 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 ZNF7P17097 686 aaPredicted RBP21■□□□□ 0.95
CPNE1-204ENST00000397443 HORMAD1Q86X24 394 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 RBFAQ8N0V3 343 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 FAM160A2Q8N612 972 aaPredicted RBP21■□□□□ 0.95
CPNE1-204ENST00000397443 ULK4Q96C45 1275 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 CLPBQ9H078 707 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 C12orf65Q9H3J6 166 aaKnown RBP21■□□□□ 0.95
CPNE1-204ENST00000397443 ZDHHC3Q9NYG2 299 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 SENP1Q9P0U3 644 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 USP36Q9P275 1121 aaKnown RBP21■□□□□ 0.95
CPNE1-204ENST00000397443 NFKBIL1Q9UBC1 381 aaPredicted RBP21■□□□□ 0.95
CPNE1-204ENST00000397443 VWA7Q9Y334 891 aa21■□□□□ 0.95
CPNE1-204ENST00000397443 AGAP14A8MT82 685 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 PRMT5O14744 637 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-204ENST00000397443 SLC25A14O95258 325 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-204ENST00000397443 SOD1P00441 154 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 STMN1P16949 149 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 ITGB6P18564 788 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 RPS9P46781 194 aaKnown RBP20.99■□□□□ 0.95
CPNE1-204ENST00000397443 WSCD2Q2TBF2 565 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 CTSL3PQ5NE16 218 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 LYPLAL1Q5VWZ2 237 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 KIAA1161Q6NSJ0 714 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 TIFABQ6ZNK6 161 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 ANKRD42Q8N9B4 389 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 EDAQ92838 391 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 SLC17A9Q9BYT1 436 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 PREBQ9HCU5 417 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 SARS2Q9NP81 518 aaKnown RBP20.99■□□□□ 0.95
CPNE1-204ENST00000397443 MBNL1Q9NR56 388 aaKnown RBP20.99■□□□□ 0.95
CPNE1-204ENST00000397443 INVSQ9Y283 1065 aa20.99■□□□□ 0.95
CPNE1-204ENST00000397443 NIPSNAP2O75323 286 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 RHOBTB1O94844 696 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 PPP2R2AP63151 447 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 B4GALNT1Q00973 533 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 IRF9Q00978 393 aa20.98■□□□□ 0.95
CPNE1-204ENST00000397443 CREB5Q02930 508 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms