RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 UGT1A6P19224 532 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 UGT1A1P22309 533 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 UGT1A4P22310 534 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 RPS3P23396 243 aaKnown RBP eCLIP23.37■■□□□ 1.336e-8■■■■■ 37.4
TSPAN4-202ENST00000397396 UGT1A3P35503 534 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 UGT1A5P35504 534 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 NSG1P42857 185 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 PPP2CBP62714 309 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 PPP2CAP67775 309 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 DBN1Q16643 649 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 LPGAT1Q92604 370 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 DCUN1D1Q96GG9 259 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 CLPBQ9H078 707 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 CENPHQ9H3R5 247 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 UGT1A7Q9HAW7 530 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 UGT1A10Q9HAW8 530 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 UGT1A8Q9HAW9 530 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 TBK1Q9UHD2 729 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 NCOR1O75376 2440 aa23.37■■□□□ 1.33
TSPAN4-202ENST00000397396 UBA6A0AVT1 1052 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 PRMT5O14744 637 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 PAK4O96013 591 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 ESR1P03372 595 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 HNRNPA2B1P22626 353 aaKnown RBP23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 AKT2P31751 481 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 WSCD2Q2TBF2 565 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 GPRC6AQ5T6X5 926 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 AGBL2Q5U5Z8 902 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 FAM45BPQ6NSW5 357 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 PNCKQ6P2M8 343 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 C11orf74Q86VG3 221 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 FBXL6Q8N531 539 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 TP53I13Q8NBR0 393 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 CADM4Q8NFZ8 388 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 GDAP1Q8TB36 358 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 FAM45AQ8TCE6 357 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 GPR22Q99680 433 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 FAM126AQ9BYI3 521 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 CTNNAL1Q9UBT7 734 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 GNPTGQ9UJJ9 305 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 TRPM6Q9BX84 2022 aa23.36■■□□□ 1.33
TSPAN4-202ENST00000397396 IGLV3-16A0A075B6K0 115 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 FADS2P1A8MWK0 482 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 C10orf142B7Z368 130 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 TOR1BO14657 336 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 FAM155BO75949 473 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 HAUS5O94927 633 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 PCCBP05166 539 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 PRSS56P0CW18 603 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 GABRB3P28472 473 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 CDKN1CP49918 316 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 IRF4Q15306 451 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 LDB1Q86U70 411 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 C1orf210Q8IVY1 113 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 TSPAN17Q96FV3 270 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 LRRK1Q38SD2 2015 aa23.35■■□□□ 1.33
TSPAN4-202ENST00000397396 FAM95CA0A1B0GW59 222 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 AP2A2O94973 939 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 SLC25A14O95258 325 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 SOD1P00441 154 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 MSH3P20585 1137 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 MAT2AP31153 395 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 AKT1P31749 480 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 PXNP49023 591 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 SERPINB8P50452 374 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 SLC12A2P55011 1212 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 POU4F1Q01851 419 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 FGL2Q14314 439 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 MROH9Q5TGP6 573 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 CNSTQ6PJW8 725 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 TIFABQ6ZNK6 161 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 CCDC91Q7Z6B0 441 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 WDR5BQ86VZ2 330 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 GPATCH11Q8N954 259 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 FAM174AQ8TBP5 190 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 CENPTQ96BT3 561 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 HIC2Q96JB3 615 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 GPR174Q9BXC1 333 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 WDR26Q9H7D7 661 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 PHPT1Q9NRX4 125 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 FBXO4Q9UKT5 387 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 VCANP13611 3396 aa23.34■■□□□ 1.33
TSPAN4-202ENST00000397396 HMGB1P1B2RPK0 211 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 TRIM49D1C9J1S8 452 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 FPGTO14772 594 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 GPR39O43194 453 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 FSBPO95073 299 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 MT-ND3P03897 115 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 PKMP14618 531 aaKnown RBP23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 TMEM31Q5JXX7 168 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 DTWD2Q8NBA8 298 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 RLN3Q8WXF3 142 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 FOXJ1Q92949 421 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 ATXN7L3BQ96GX2 97 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 ELMO2Q96JJ3 720 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 TSSK1BQ9BXA7 367 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 C6orf106Q9H6K1 298 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 CRYL1Q9Y2S2 319 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 ACTL7BQ9Y614 415 aa23.33■■□□□ 1.33
TSPAN4-202ENST00000397396 PLXND1Q9Y4D7 1925 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms