RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 RPL3P39023 403 aaKnown RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 MTHFRP42898 656 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 C2orf80Q0P641 193 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 GRIK2Q13002 908 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 SLC13A2Q13183 592 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 MAD2L1BPQ15013 274 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 ZNF565Q8N9K5 539 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 HEXDCQ8WVB3 486 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 SLC7A6OSQ96CW6 309 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 USB1Q9BQ65 265 aaKnown RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 PCDH9Q9HC56 1237 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 KCNE2Q9Y6J6 123 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 MLYCDO95822 493 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 PSKH1P11801 424 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ADRA1DP25100 572 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 SLC7A1P30825 629 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 GRK1Q15835 563 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 DNAJB7Q7Z6W7 309 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 CEP76Q8TAP6 659 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 NPAS2Q99743 824 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ASPNQ9BXN1 380 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ABCG2Q9UNQ0 655 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 A0A1W2PQJ5 194 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 SLC9A3R1O14745 358 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 AXIN1O15169 862 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 RNASEH2AO75792 299 aaKnown RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 IL33O95760 270 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 CREG2Q8IUH2 290 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ZNF101Q8IZC7 436 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 GATAD2BQ8WXI9 593 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 TTYH2Q9BSA4 534 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 FUT8Q9BYC5 575 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 PNO1Q9NRX1 252 aaKnown RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 ETAA1Q9NY74 926 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 CD84Q9UIB8 345 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ITGA11Q9UKX5 1188 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 WASHC1A8K0Z3 465 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 VSTM5A8MXK1 200 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 WASH3PC4AMC7 463 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 MAGEC1O60732 1142 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 RAB4AP20338 218 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 CXCR3P49682 368 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 CPTPQ5TA50 214 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 WASH2PQ6VEQ5 465 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ZSCAN4Q8NAM6 433 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 POC1BQ8TC44 478 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 SLC5A7Q9GZV3 580 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 CAPN6Q9Y6Q1 641 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 KDM6AO15550 1401 aaPredicted RBP12.27□□□□□ -0.44
SMU1-201ENST00000397149 PDPK1O15530 556 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 MT-ND1P03886 318 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 CDH11P55287 796 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 ANXA8L1Q5VT79 327 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 MOXD1Q6UVY6 613 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 C17orf64Q86WR6 236 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 LIX1Q8N485 282 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 NKAPQ8N5F7 415 aaKnown RBP12.27□□□□□ -0.44
SMU1-201ENST00000397149 MAB21L3Q8N8X9 362 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 OR5J2Q8NH18 312 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 SMG7Q92540 1137 aaKnown RBP12.27□□□□□ -0.44
SMU1-201ENST00000397149 SLC39A3Q9BRY0 314 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 CDHR2Q9BYE9 1310 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 MAT2AP31153 395 aaKnown RBP12.27□□□□□ -0.44
SMU1-201ENST00000397149 CSTF1Q05048 431 aaKnown RBP12.27□□□□□ -0.44
SMU1-201ENST00000397149 TTMPQ5BVD1 217 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 TNS4Q8IZW8 715 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 SMARCD2Q92925 531 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 ERMAPQ96PL5 475 aaPredicted RBP12.27□□□□□ -0.44
SMU1-201ENST00000397149 ELOVL4Q9GZR5 314 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 AP3M1Q9Y2T2 418 aa12.27□□□□□ -0.44
SMU1-201ENST00000397149 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 NPEPPSL1A6NEC2 478 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 ZNF726A6NNF4 738 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 LACTBL1A8MY62 500 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 CALCAP01258 141 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 COX4I1P13073 169 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 MAGEA6P43360 314 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 ANTXR2P58335 489 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 BLMHQ13867 455 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 NDUFA9Q16795 377 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 SPATC1Q76KD6 591 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 CFAP52Q8N1V2 620 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 BOLLQ8N9W6 283 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 FARSAQ9Y285 508 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 E7ENX8 843 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 DDX3YO15523 660 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 NOL4O94818 638 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 PGLSO95336 258 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 ATP4AP20648 1035 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 HYAL2Q12891 473 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 DPYSQ14117 519 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 POGLUT1Q8NBL1 392 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 OR4C6Q8NH72 309 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 OR8D1Q8WZ84 308 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 HDAC2Q92769 488 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 XKR8Q9H6D3 395 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 DHRS12A0PJE2 317 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms