RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 HSD3B1P14060 373 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 UQCRBP14927 111 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 AOC1P19801 751 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HSD3B2P26439 372 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TARSP26639 723 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GSTM5P46439 218 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CBLBQ13191 982 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SP140Q13342 867 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 BOP1Q14137 746 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HERC3Q15034 1050 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SIX1Q15475 284 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 LACTB2Q53H82 288 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ANGPTL8Q6UXH0 198 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TPGS1Q6ZTW0 290 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CNTN4Q8IWV2 1026 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CMTM8Q8IZV2 173 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF555Q8NEP9 628 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 OR10T2Q8NGX3 314 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 MAGED4Q96JG8 741 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TDRD1Q9BXT4 1180 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 RPS6KA6Q9UK32 745 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GNG14A0A1W2PPG7 69 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 CCDC154A6NI56 674 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TSPAN6O43657 245 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 WFS1O76024 890 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ESRRBO95718 433 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GSTM2P28161 218 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TLX1P31314 330 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 OGDHQ02218 1023 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 TBL3Q12788 808 aaKnown RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 BNIP1Q12981 228 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 PDE1CQ14123 709 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ZYG11AQ6WRX3 759 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 GPR150Q8NGU9 434 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 BPIFB1Q8TDL5 484 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 POF1BQ8WVV4 589 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 LENG1Q96BZ8 264 aaPredicted RBP3.37□□□□□ -1.87
VPS13C-203ENST00000395896 HMCESQ96FZ2 354 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 C9orf16Q9BUW7 83 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FAIM2Q9BWQ8 316 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 DERL2Q9GZP9 239 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SLCO1B3Q9NPD5 702 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 FAM53CQ9NYF3 392 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 ACSL5Q9ULC5 683 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 SNX5Q9Y5X3 404 aa3.37□□□□□ -1.87
VPS13C-203ENST00000395896 IGLV3-10A0A075B6K4 115 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HMGB3O15347 200 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 KERAO60938 352 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PCDH8O95206 1070 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ITGAXP20702 1163 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DRD4P21917 467 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 MAGEA3P43357 314 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SOX4Q06945 474 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ACOX1Q15067 660 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 GDPD4Q6W3E5 623 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PATL1Q86TB9 770 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SPDL1Q96EA4 605 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 RTKNQ9BST9 563 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TXLNGYQ9BZA5 131 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 NOD2Q9HC29 1040 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DNAJC28Q9NX36 388 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ANKHD1Q8IWZ3 2542 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 GSRP00390 522 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 GPR1P46091 355 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CSNK1DP48730 415 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DGKGP49619 791 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SLC34A1Q06495 639 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FAM98BQ52LJ0 330 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 PLEKHS1Q5SXH7 462 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ARMC6Q6NXE6 501 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 LLGL2Q6P1M3 1020 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DEFB107AQ8IZN7 70 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TNS4Q8IZW8 715 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FAM174AQ8TBP5 190 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ACTRT2Q8TDY3 377 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TBC1D10AQ9BXI6 508 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 RMI1Q9H9A7 625 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 OBP2AQ9NY56 170 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 LIN7AO14910 233 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FANCGO15287 622 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 TM7SF2O76062 418 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 ABLIM3O94929 683 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 IL6P05231 212 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 IFNGR2P38484 337 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SLC10A7Q0GE19 358 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 LSM12Q3MHD2 195 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HSF5Q4G112 596 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SYCP2LQ5T4T6 812 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CAPN13Q6MZZ7 669 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 NPNTQ6UXI9 565 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CHSY3Q70JA7 882 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 CAND1Q86VP6 1230 aaKnown RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SLC30A8Q8IWU4 369 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SLC39A11Q8N1S5 342 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 FSTL5Q8N475 847 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 SLC43A3Q8NBI5 491 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 DPY30Q9C005 99 aa3.36□□□□□ -1.87
VPS13C-203ENST00000395896 MTF2Q9Y483 593 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.36□□□□□ -1.87
VPS13C-203ENST00000395896 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms