RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SOCS5O75159 536 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 SNUPNO95149 360 aaKnown RBP15.03■□□□□ -0
SCAF11-204ENST00000395454 PIRTP0C851 137 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 LPOP22079 712 aaPredicted RBP15.03■□□□□ -0
SCAF11-204ENST00000395454 SERPINB3P29508 390 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 CCNHP51946 323 aaPredicted RBP15.03■□□□□ -0
SCAF11-204ENST00000395454 SLC12A2P55011 1212 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 GAS6Q14393 721 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 PTPRCAPQ14761 206 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 KRT72Q14CN4 511 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 TECRLQ5HYJ1 363 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 EOGTQ5NDL2 527 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 C9orf64Q5T6V5 341 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 ZNF549Q6P9A3 640 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 WDR75Q8IWA0 830 aaKnown RBP15.03■□□□□ -0
SCAF11-204ENST00000395454 LPCAT1Q8NF37 534 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 INPP5DQ92835 1189 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 NXNL1Q96CM4 212 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 NDNQ99608 321 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 GABRG3Q99928 467 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 DRC3Q9H069 523 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 POLR3BQ9NW08 1133 aaPredicted RBP15.03■□□□□ -0
SCAF11-204ENST00000395454 XPR1Q9UBH6 696 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 EVLQ9UI08 416 aaPredicted RBP15.03■□□□□ -0
SCAF11-204ENST00000395454 LNPEPQ9UIQ6 1025 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 RUVBL2Q9Y230 463 aaKnown RBP15.03■□□□□ -0
SCAF11-204ENST00000395454 DNAJC16Q9Y2G8 782 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 CKAP5Q14008 2032 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 LYPLA1O75608 230 aaPredicted RBP15.02■□□□□ -0
SCAF11-204ENST00000395454 PGLSO95336 258 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 CD9P21926 228 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 GKP32189 559 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 HK2P52789 917 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 PGGT1BP53609 377 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 DNAJB13P59910 316 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 TIAL1Q01085 375 aaKnown RBP eCLIP15.02■□□□□ -0
SCAF11-204ENST00000395454 TUBB3Q13509 450 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 ELAVL3Q14576 367 aaKnown RBP15.02■□□□□ -0
SCAF11-204ENST00000395454 FAM83EQ2M2I3 478 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 CWF19L1Q69YN2 538 aaKnown RBP15.02■□□□□ -0
SCAF11-204ENST00000395454 KIAA1211LQ6NV74 962 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 TBC1D1Q86TI0 1168 aaPredicted RBP15.02■□□□□ -0
SCAF11-204ENST00000395454 GRIN3AQ8TCU5 1115 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 PPP4R1Q8TF05 950 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 HEXDCQ8WVB3 486 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 PIH1D2Q8WWB5 315 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 LPGAT1Q92604 370 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 GATA5Q9BWX5 397 aaPredicted RBP15.02■□□□□ -0
SCAF11-204ENST00000395454 ZDHHC6Q9H6R6 413 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 MAGEE1Q9HCI5 957 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 PRSS16Q9NQE7 514 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 MMP17Q9ULZ9 603 aa15.02■□□□□ -0
SCAF11-204ENST00000395454 LTA4HP09960 611 aaKnown RBP15.02□□□□□ -0.01
SCAF11-204ENST00000395454 SAT1P21673 171 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 SERPINB5P36952 375 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 AQP5P55064 265 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 CDKN2DP55273 166 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 ACAP2Q15057 778 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 AGAP9Q5VTM2 703 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 SDCCAG8Q86SQ7 713 aaPredicted RBP15.02□□□□□ -0.01
SCAF11-204ENST00000395454 CACUL1Q86Y37 369 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 STK40Q8N2I9 435 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 CHST14Q8NCH0 376 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 OR4K2Q8NGD2 314 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 PDCD6IPQ8WUM4 868 aaKnown RBP15.02□□□□□ -0.01
SCAF11-204ENST00000395454 CLDN23Q96B33 292 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 TMEM237Q96Q45 408 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 TUBB6Q9BUF5 446 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 SLC40A1Q9NP59 571 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 DNAJC28Q9NX36 388 aa15.02□□□□□ -0.01
SCAF11-204ENST00000395454 CPSF2Q9P2I0 782 aaKnown RBP15.02□□□□□ -0.01
SCAF11-204ENST00000395454 A0A1W2PQF6 199 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 CAPN14A8MX76 684 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 H0YHG0 523 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 PI15O43692 258 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 DLX3O60479 287 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 ATG13O75143 517 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 POP4O95707 220 aaKnown RBP15.01□□□□□ -0.01
SCAF11-204ENST00000395454 ADARP55265 1226 aaKnown RBP15.01□□□□□ -0.01
SCAF11-204ENST00000395454 RAD51Q06609 339 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 ASPHQ12797 758 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 CRY1Q16526 586 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 MYLK3Q32MK0 819 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 MAVSQ7Z434 540 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 LDB1Q86U70 411 aaPredicted RBP15.01□□□□□ -0.01
SCAF11-204ENST00000395454 OR8D1Q8WZ84 308 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 KLHL29Q96CT2 875 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 SLC7A6OSQ96CW6 309 aaPredicted RBP15.01□□□□□ -0.01
SCAF11-204ENST00000395454 PTCD3Q96EY7 689 aaKnown RBP15.01□□□□□ -0.01
SCAF11-204ENST00000395454 AARSD1Q9BTE6 412 aaKnown RBP15.01□□□□□ -0.01
SCAF11-204ENST00000395454 CHRDQ9H2X0 955 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 GPAMQ9HCL2 828 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 IL36AQ9UHA7 158 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 VPS9D1Q9Y2B5 631 aa15.01□□□□□ -0.01
SCAF11-204ENST00000395454 FCHO1O14526 889 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 BUD23O43709 281 aaKnown RBP15□□□□□ -0.01
SCAF11-204ENST00000395454 PIGNO95427 931 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 RBP1P09455 135 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 COL9A1P20849 921 aa15□□□□□ -0.01
SCAF11-204ENST00000395454 HMGCLP35914 325 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms