RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 STC1P52823 247 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 CCDC15Q0P6D6 951 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 SKIV2LQ15477 1246 aaKnown RBP15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 AP5B1Q2VPB7 878 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 MPPE1Q53F39 396 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 AARS2Q5JTZ9 985 aaKnown RBP15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 TRAPPC5Q8IUR0 188 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 CHST14Q8NCH0 376 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 EME1Q96AY2 570 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 RGSL1A5PLK6 1076 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 ECI2O75521 394 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 RHOP08100 348 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 ATXN1LP0C7T5 689 aaKnown RBP15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 PRDX3P30048 256 aaKnown RBP15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 HTR7P34969 479 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 PPP3CCP48454 512 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 FOXA1P55317 472 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 CLCQ05315 142 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 NFYCQ13952 458 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 PLEKHG6Q3KR16 790 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 TMEM259Q4ZIN3 620 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 ARSIQ5FYB1 569 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 MAVSQ7Z434 540 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 AMIGO2Q86SJ2 522 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 YAF2Q8IY57 180 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 OSGEPL1Q9H4B0 414 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 PRKAB1Q9Y478 270 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 MMP2P08253 660 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 MAP4P27816 1152 aaKnown RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 VHLP40337 213 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 SERPINA13PQ6UXR4 307 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 ATG14Q6ZNE5 492 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 LMNTD1Q8N9Z9 388 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 C2orf15Q8WU43 125 aaKnown RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 TWIST2Q8WVJ9 160 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 SLC30A3Q99726 388 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 THUMPD3Q9BV44 507 aaKnown RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 NSUN3Q9H649 340 aaKnown RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 TDP1Q9NUW8 608 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 INSL6Q9Y581 213 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 COPG1Q9Y678 874 aaKnown RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 LMNAP02545 664 aaKnown RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 NFKBIAP25963 317 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 ADRA1AP35348 466 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 KCNK10P57789 538 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 DSG1Q02413 1049 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 SLC34A1Q06495 639 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 MRPL58Q14197 206 aaKnown RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 ACAP2Q15057 778 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 PREPLQ4J6C6 727 aaPredicted RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 SLC44A4Q53GD3 710 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 LRRC66Q68CR7 880 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 C16orf89Q6UX73 402 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 KIAA0408Q6ZU52 694 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 ADCK2Q7Z695 626 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 ELMO1Q92556 727 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 C19orf60Q96EN9 201 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 TRIM54Q9BYV2 358 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 PKD2L2Q9NZM6 624 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 PPM1HQ9ULR3 514 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 COQ6Q9Y2Z9 468 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 KANSL1LA0AUZ9 987 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 SYCE1LA8MT33 242 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 GSTA4O15217 222 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 SNNO75324 88 aaPredicted RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 ATP6V1B1P15313 513 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 C1QTNF8P60827 252 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 TMEM154Q6P9G4 183 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 FBXL19Q6PCT2 694 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 CRTC3Q6UUV7 619 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 Q6ZVL8 140 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 USP45Q70EL2 814 aa15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 TRMT11Q7Z4G4 463 aaKnown RBP15.78■□□□□ 0.12
SMARCD1-202ENST00000394963 ATXN2Q99700 1313 aaKnown RBP15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 WASH3PC4AMC7 463 aa15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 KLF11O14901 512 aa15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 HNF1BP35680 557 aa15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 SKIV2L2P42285 1042 aaKnown RBP15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 SLC7A2P52569 658 aa15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 HMGCS1Q01581 520 aa15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 TAF1AQ15573 450 aaPredicted RBP15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 SETD3Q86TU7 594 aaPredicted RBP15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 PTCD2Q8WV60 388 aaKnown RBP15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 COPS8Q99627 209 aa15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 TREX1Q9NSU2 369 aa15.77■□□□□ 0.12
SMARCD1-202ENST00000394963 MATN2O00339 956 aa15.77■□□□□ 0.11
SMARCD1-202ENST00000394963 SEC22BO75396 215 aa15.77■□□□□ 0.11
SMARCD1-202ENST00000394963 ZNF37AP17032 561 aaPredicted RBP15.77■□□□□ 0.11
SMARCD1-202ENST00000394963 FPGSQ05932 587 aa15.77■□□□□ 0.11
SMARCD1-202ENST00000394963 NMRK1Q9NWW6 199 aa15.77■□□□□ 0.11
SMARCD1-202ENST00000394963 HCFC2Q9Y5Z7 792 aa15.77■□□□□ 0.11
SMARCD1-202ENST00000394963 TMEM114B3SHH9 223 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 DIO3P55073 304 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 STX5Q13190 355 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 RAB33AQ14088 237 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 ZNF284Q2VY69 593 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 IYDQ6PHW0 289 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 TMEM207Q6UWW9 146 aa15.76■□□□□ 0.11
SMARCD1-202ENST00000394963 RD3Q7Z3Z2 195 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms