RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 POC5Q8NA72 575 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 DQX1Q8TE96 717 aaKnown RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 RORBQ92753 470 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 HAPLN3Q96S86 360 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 MYOCQ99972 504 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SLAMF8Q9P0V8 285 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TRPV2Q9Y5S1 764 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 CEPT1Q9Y6K0 416 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 PNMA8CA0A1B0GUJ8 204 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 OR4F21O95013 312 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 FYNP06241 537 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 FMO3P31513 532 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 AGTR2P50052 363 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 FAM98BQ52LJ0 330 aaKnown RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 BBS5Q8N3I7 341 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 KDM1BQ8NB78 822 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 OR10A6Q8NH74 314 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 BORCS5Q969J3 196 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 FAR2Q96K12 515 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 C3orf30Q96M34 536 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 SMIM14Q96QK8 99 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 OLFM1Q99784 485 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 SLC27A5Q9Y2P5 690 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 UPK3BL1B0FP48 263 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 UPK3BL2E5RIL1 263 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 J3KR12 359 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 TFECO14948 347 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 STX7O15400 261 aaKnown RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 ZSCAN9O15535 394 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 CLASP2O75122 1294 aaKnown RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 SEC22BO75396 215 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 HLA-DQB2P05538 268 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 ODC1P11926 461 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 WARSP23381 471 aaKnown RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 GPR15P49685 360 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 CDK9P50750 372 aaKnown RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 SLC7A5P1Q8MH63 180 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 OR8H2Q8N162 312 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 THEM5Q8N1Q8 247 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 SMYD1Q8NB12 490 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 CENPIQ92674 756 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 CCDC126Q96EE4 140 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 CCDC28BQ9BUN5 200 aa13.15□□□□□ -0.3
NFKB1-202ENST00000394820 TRMT13Q9NUP7 481 aaKnown RBP13.15□□□□□ -0.3
NFKB1-202ENST00000394820 H3BNH8 94 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 AKR1A1P14550 325 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 KCNE1P15382 129 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 GRK4P32298 578 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 CD68P34810 354 aaPredicted RBP13.15□□□□□ -0.31
NFKB1-202ENST00000394820 GSK3BP49841 420 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.31
NFKB1-202ENST00000394820 SLC10A7Q0GE19 358 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 CPSF6Q16630 551 aaKnown RBP eCLIP13.15□□□□□ -0.31
NFKB1-202ENST00000394820 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.31
NFKB1-202ENST00000394820 SMYD5Q6GMV2 418 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 DUS1LQ6P1R4 473 aaKnown RBP13.15□□□□□ -0.31
NFKB1-202ENST00000394820 AGMOQ6ZNB7 445 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 C16orf59Q7L2K0 433 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 ADGRG6Q86SQ4 1221 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 GALNT10Q86SR1 603 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 GLT1D1Q96MS3 346 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 EPB41L1Q9H4G0 881 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 FBXW11Q9UKB1 542 aa13.15□□□□□ -0.31
NFKB1-202ENST00000394820 POLR3HQ9Y535 204 aaPredicted RBP13.15□□□□□ -0.31
NFKB1-202ENST00000394820 NCAM2O15394 837 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 F9P00740 461 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 GLDCP23378 1020 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 PBX3P40426 434 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 CCT8P50990 548 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 RAD51Q06609 339 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 CMTR2Q8IYT2 770 aaKnown RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 FNDC8Q8TC99 324 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 RTP4Q96DX8 246 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 FAM120BQ96EK7 910 aaKnown RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 AURKBQ96GD4 344 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 GPR63Q9BZJ6 419 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 BLOC1S6Q9UL45 172 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 PCDHGA7Q9Y5G6 932 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 ASCC3Q8N3C0 2202 aaKnown RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 NT5C1B-RDH14C9J2C7 533 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 GPR182O15218 404 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 KRT75O95678 551 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 GABRB3P28472 473 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 BROXQ5VW32 411 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 RSBN1Q5VWQ0 802 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 SLC22A9Q8IVM8 553 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 ST13P5Q8NFI4 369 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 STYXQ8WUJ0 223 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 GPR22Q99680 433 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 TPK1Q9H3S4 243 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 TNFRSF12AQ9NP84 129 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 WWOXQ9NZC7 414 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 EIF2B4Q9UI10 523 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms