RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PIH1D2Q8WWB5 315 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 PPP2R3CQ969Q6 453 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 OTUB2Q96DC9 234 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ERP27Q96DN0 273 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 MYO19Q96H55 970 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 CDKN2AIPNLQ96HQ2 116 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ELMO2Q96JJ3 720 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 CDCA3Q99618 268 aaPredicted RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 GPR22Q99680 433 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 UNKQ9C0B0 810 aaKnown RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 CIPCQ9C0C6 399 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 MFSD1Q9H3U5 465 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 MTG2Q9H4K7 406 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ALG2Q9H553 416 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ATP13A3Q9H7F0 1226 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 MANSC1Q9H8J5 431 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 TMEM216Q9P0N5 145 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 DLGAP2Q9P1A6 1054 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ATXN10Q9UBB4 475 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 DCDC2Q9UHG0 476 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 EMCNQ9ULC0 261 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 HS3ST2Q9Y278 367 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 CRYL1Q9Y2S2 319 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 FAM95CA0A1B0GW59 222 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 CD3EAPO15446 510 aaKnown RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 COQ9O75208 318 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 TCF3P15923 654 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 LPOP22079 712 aaPredicted RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 PMLP29590 882 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 MAGEA12P43365 314 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 SLC6A11P48066 632 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 CDKN1CP49918 316 aaPredicted RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 ZNF140P52738 457 aaPredicted RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 TAS2R39P59534 338 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 SNRPD1P62314 119 aaKnown RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 XIAPP98170 497 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ACVR1Q04771 509 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 DLX2Q07687 328 aaPredicted RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 GRIN2CQ14957 1233 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 C22orf39Q6P5X5 142 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 DPY19L3Q6ZPD9 716 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 NLRP8Q86W28 1048 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 LONP2Q86WA8 852 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ZSWIM9Q86XI8 627 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 TDHQ8IZJ6 230 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 TNS4Q8IZW8 715 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 CHST14Q8NCH0 376 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 OR4L1Q8NH43 312 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 GRIN3AQ8TCU5 1115 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 CALML6Q8TD86 181 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 VOPP1Q96AW1 172 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 EID2BQ96D98 161 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ABHD17AQ96GS6 310 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 GBP5Q96PP8 586 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ZNF184Q99676 751 aaPredicted RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 OMDQ99983 421 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 CENPKQ9BS16 269 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 GPR63Q9BZJ6 419 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 FAM96AQ9H5X1 160 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 NSUN3Q9H649 340 aaKnown RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 DENND2DQ9H6A0 471 aaPredicted RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 ZDHHC6Q9H6R6 413 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 DZANK1Q9NVP4 752 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 NLE1Q9NVX2 485 aaPredicted RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 POLR3BQ9NW08 1133 aaPredicted RBP6.92□□□□□ -1.3
RTN4-205ENST00000394609 IRAK4Q9NWZ3 460 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 MKS1Q9NXB0 559 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 MARK1Q9P0L2 795 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 SLC25A13Q9UJS0 675 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 TLK1Q9UKI8 766 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 ANGPTL2Q9UKU9 493 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 PHTF1Q9UMS5 762 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 MYOFQ9NZM1 2061 aa6.92□□□□□ -1.3
RTN4-205ENST00000394609 CHD5Q8TDI0 1954 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 MTCL1Q9Y4B5 1905 aaKnown RBP6.91□□□□□ -1.3
RTN4-205ENST00000394609 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.91□□□□□ -1.3
RTN4-205ENST00000394609 TTC34A8MYJ7 566 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 STX7O15400 261 aaKnown RBP6.91□□□□□ -1.3
RTN4-205ENST00000394609 GPR39O43194 453 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 HTRA2O43464 458 aaPredicted RBP6.91□□□□□ -1.3
RTN4-205ENST00000394609 PLIN3O60664 434 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 GLRA3O75311 464 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 TULP3O75386 442 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 TGDSO95455 350 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 GSRP00390 522 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 MPOP05164 745 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 UGT2B4P06133 528 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 CISD3P0C7P0 127 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 SLC35E2BP0CK96 405 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 TROVE2P10155 538 aaKnown RBP eCLIP6.91□□□□□ -1.3
RTN4-205ENST00000394609 STMN1P16949 149 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 HNF1BP35680 557 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 HADHAP40939 763 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 GLRBP48167 497 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 LEPRP48357 1165 aaKnown RBP6.91□□□□□ -1.3
RTN4-205ENST00000394609 CSNK1DP48730 415 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 DGKGP49619 791 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 RAP1GDS1P52306 607 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 SLC12A2P55011 1212 aa6.91□□□□□ -1.3
RTN4-205ENST00000394609 SULT2A1Q06520 285 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms