RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 MFSD14CQ5VZR4 134 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 OGFOD2Q6N063 350 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 P3H2Q8IVL5 708 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 FIBCD1Q8N539 461 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 OR2T12Q8NG77 320 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 OR10A6Q8NH74 314 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 ROGDIQ9GZN7 287 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 TMLHEQ9NVH6 421 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 HIST1H2AGP0C0S8 130 aaPredicted RBP16.03■□□□□ 0.16
PCDH1-203ENST00000394536 SMIM18P0DKX4 95 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 RHOQP17081 205 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 HLA-DPA1P20036 260 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 HIST1H2ADP20671 130 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 UGT1A1P22309 533 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 UGT1A4P22310 534 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 UGT1A3P35503 534 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 UGT1A5P35504 534 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 CAPGP40121 348 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 PFKPQ01813 784 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 LAPTM5Q13571 262 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 ZBED5Q49AG3 693 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 KCTD11Q693B1 232 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 FBXL22Q6P050 247 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 DENND1CQ8IV53 801 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 HS6ST3Q8IZP7 471 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 IRGQQ8WZA9 623 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 HIST1H2AHQ96KK5 128 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 HIST1H2AJQ99878 128 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 H2AFJQ9BTM1 129 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 ADGRE3Q9BY15 652 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 UGT2B28Q9BY64 529 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 NMUR1Q9HB89 426 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 TSC22D4Q9Y3Q8 395 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 IQCF5A8MTL0 148 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 FBP2O00757 339 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 F2P00734 622 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 CAPN3P20807 821 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 KLHL35Q6PF15 583 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 RANBP10Q6VN20 620 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 BNIPLQ7Z465 357 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 ISCA2Q86U28 154 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 EID3Q8N140 333 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 RORBQ92753 470 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 RAD21L1Q9H4I0 556 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 IGSF5Q9NSI5 407 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 IFT80Q9P2H3 777 aaPredicted RBP16.03■□□□□ 0.16
PCDH1-203ENST00000394536 SH3BP1Q9Y3L3 701 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 LOXHD1Q8IVV2 1947 aa16.03■□□□□ 0.16
PCDH1-203ENST00000394536 AQP12BA6NM10 295 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 I6L893 689 aaPredicted RBP16.02■□□□□ 0.16
PCDH1-203ENST00000394536 GPIP06744 558 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 ANXA6P08133 673 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 PKMP14618 531 aaKnown RBP16.02■□□□□ 0.16
PCDH1-203ENST00000394536 SCAPQ12770 1279 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 MAP2K5Q13163 448 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 TTC23Q5W5X9 447 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 AQP12AQ8IXF9 295 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 HM13Q8TCT9 377 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 ISOC1Q96CN7 298 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 TRIM54Q9BYV2 358 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 UBR3Q6ZT12 1888 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 A0A0J9YVX5 310 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 G3V2T6 193 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 ECI2O75521 394 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 SERPINB10P48595 397 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 DNAJB13P59910 316 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 RGS21Q2M5E4 152 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 EGFLAMQ63HQ2 1017 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 UGT3A1Q6NUS8 523 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 CDKN2AIPNLQ96HQ2 116 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 C11orf84Q9BUA3 381 aaPredicted RBP16.02■□□□□ 0.16
PCDH1-203ENST00000394536 TMEM30AQ9NV96 361 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 TRNAU1APQ9NX07 287 aaKnown RBP16.02■□□□□ 0.16
PCDH1-203ENST00000394536 GJD2Q9UKL4 321 aa16.02■□□□□ 0.16
PCDH1-203ENST00000394536 PNMA8BQ9ULN7 279 aaPredicted RBP16.02■□□□□ 0.16
PCDH1-203ENST00000394536 LINC00854A0A1B0GVQ3 168 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 MAGP20916 626 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 TRIM74Q86UV6 250 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 TRIM73Q86UV7 250 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 LRRTM3Q86VH5 581 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 ANKRD46Q86W74 232 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 CMTR2Q8IYT2 770 aaKnown RBP16.02■□□□□ 0.15
PCDH1-203ENST00000394536 BRI3BPQ8WY22 251 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 ACTR3BQ9P1U1 418 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 FKBPLQ9UIM3 349 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 KCNH4Q9UQ05 1017 aa16.02■□□□□ 0.15
PCDH1-203ENST00000394536 AGRPO00253 132 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 ACOT8O14734 319 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 FTH1P02794 183 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 ZNF26P17031 533 aaPredicted RBP16.01■□□□□ 0.15
PCDH1-203ENST00000394536 HOXB8P17481 243 aaPredicted RBP16.01■□□□□ 0.15
PCDH1-203ENST00000394536 LPOP22079 712 aaPredicted RBP16.01■□□□□ 0.15
PCDH1-203ENST00000394536 KCNC1P48547 511 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 HSPA7P48741 367 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 INHBCP55103 352 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 PIGFQ07326 219 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 LRP8Q14114 963 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 DMC1Q14565 340 aa16.01■□□□□ 0.15
PCDH1-203ENST00000394536 CARTPTQ16568 116 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms