RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 IQCF5A8MTL0 148 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 PLK4O00444 970 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 NEMP1O14524 444 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ZBTB14O43829 449 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 H2AFYO75367 372 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 WISP3O95389 354 aaPredicted RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 TGDSO95455 350 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 CD1DP15813 335 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ETV3P41162 512 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 SKIV2L2P42285 1042 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 SUOXP51687 545 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ARFIP2P53365 341 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 METAP1P53582 386 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 PRKAA2P54646 552 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 PFKPQ01813 784 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ASPHQ12797 758 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 HTR4Q13639 388 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 LRIT3Q3SXY7 679 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ATP13A5Q4VNC0 1218 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 LIPMQ5VYY2 423 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 UGT3A1Q6NUS8 523 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 C6orf89Q6UWU4 347 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 NAPRTQ6XQN6 538 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 DPPA4Q7L190 304 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 HSD11B1LQ7Z5J1 315 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 DSG4Q86SJ6 1040 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 MMAAQ8IVH4 418 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 CHPFQ8IZ52 775 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 NXPE1Q8N323 547 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ARRDC3Q96B67 414 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 MOCOSQ96EN8 888 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 PPP1R16AQ96I34 528 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 PLEKHG4BQ96PX9 1271 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 FAM129BQ96TA1 746 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 GAS2L1Q99501 681 aaPredicted RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 P2RY13Q9BPV8 354 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 WRAP53Q9BUR4 548 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 GATA5Q9BWX5 397 aaPredicted RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 P2RY12Q9H244 342 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TMEM245Q9H330 911 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 FAM83DQ9H4H8 585 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 CYP4F12Q9HCS2 524 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 GNPTGQ9UJJ9 305 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 PPM1HQ9ULR3 514 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ITM2BQ9Y287 266 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 DNAJC16Q9Y2G8 782 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 USH1CQ9Y6N9 552 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TICRRQ7Z2Z1 1910 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TRIOBPQ9H2D6 2365 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TRBV5-4A0A0C4DH59 114 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 NEMP2A6NFY4 417 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TMEM114B3SHH9 223 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TARM1B6A8C7 271 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 F8W8V4 182 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ARNTLO00327 626 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 SMIM24O75264 130 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TRIM16O95361 564 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ELFN1P0C7U0 828 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ATP5F1P24539 256 aaPredicted RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 ITGB7P26010 798 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 PSMD8P48556 350 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 NAGLUP54802 743 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ADARP55265 1226 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 SKIV2LQ15477 1246 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 CCDC85BQ15834 202 aaPredicted RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 SETMARQ53H47 684 aaPredicted RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 CFAP157Q5JU67 520 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 Q6ZVL8 140 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TRPM8Q7Z2W7 1104 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 CACUL1Q86Y37 369 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 NKAPQ8N5F7 415 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 CLDN19Q8N6F1 224 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ZNF513Q8N8E2 541 aaPredicted RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 C10orf82Q8WW14 230 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 KCNJ9Q92806 393 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 SCAMP4Q969E2 229 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ULK4Q96C45 1275 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 CCDC97Q96F63 343 aaPredicted RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 RMDN2Q96LZ7 410 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 SLC30A3Q99726 388 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TMEM120AQ9BXJ8 343 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 PRSS16Q9NQE7 514 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ABCF3Q9NUQ8 709 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 ZDHHC3Q9NYG2 299 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 TSR3Q9UJK0 312 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 HCN2Q9UL51 889 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 MED16Q9Y2X0 877 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 OAS3Q9Y6K5 1087 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 PRSS21Q9Y6M0 314 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 STON1Q9Y6Q2 735 aa8.57□□□□□ -1.04
TDP1-203ENST00000393454 MUC22E2RYF6 1773 aaPredicted RBP8.56□□□□□ -1.04
TDP1-203ENST00000393454 SZT2Q5T011 3432 aa8.56□□□□□ -1.04
TDP1-203ENST00000393454 ANKRD65E5RJM6 399 aa8.56□□□□□ -1.04
TDP1-203ENST00000393454 C1QTNF3-AMACRE9PGA6 284 aa8.56□□□□□ -1.04
TDP1-203ENST00000393454 ANHXE9PGG2 379 aa8.56□□□□□ -1.04
TDP1-203ENST00000393454 SLC25A14O95258 325 aaPredicted RBP8.56□□□□□ -1.04
TDP1-203ENST00000393454 KCNA5P22460 613 aa8.56□□□□□ -1.04
TDP1-203ENST00000393454 RPS3P23396 243 aaKnown RBP eCLIP8.56□□□□□ -1.04
TDP1-203ENST00000393454 TIE1P35590 1138 aa8.56□□□□□ -1.04
TDP1-203ENST00000393454 MMP12P39900 470 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms