RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 NLNQ9BYT8 704 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 MRPL17Q9NRX2 175 aaKnown RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 BAIAP2Q9UQB8 552 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 FAM92AA1XBS5 289 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 MOXD2PA6NHM9 499 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 CLPXO76031 633 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 TMEM63AO94886 807 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 NFICP08651 508 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 STARP49675 285 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 OGFOD2Q6N063 350 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 TRIM40Q6P9F5 258 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 PRR23CQ6ZRP0 262 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 USP43Q70EL4 1123 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 PIH1D2Q8WWB5 315 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 IKZF4Q9H2S9 585 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 RPS6KB2Q9UBS0 482 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 IGKV6D-41A0A0C4DH26 115 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 CASKO14936 926 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 RPLP0P05388 317 aaKnown RBP19.59■□□□□ 0.73
SHANK1-203ENST00000391813 USP17L7P0C7H9 530 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 RAP2AP10114 183 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 PTPN1P18031 435 aaKnown RBP19.59■□□□□ 0.73
SHANK1-203ENST00000391813 MVKQ03426 396 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 LCLAT1Q6UWP7 414 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 FNDC8Q8TC99 324 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 IPCEF1Q8WWN9 437 aaPredicted RBP19.59■□□□□ 0.73
SHANK1-203ENST00000391813 QRFPRQ96P65 431 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 PDP1Q9P0J1 537 aaPredicted RBP19.59■□□□□ 0.73
SHANK1-203ENST00000391813 ORC5O43913 435 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 FAM189A1O60320 539 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 CHRNGP07510 517 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 TUBA1BP68363 451 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 RHDQ02161 417 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 DGKZQ13574 1117 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 PLEKHG6Q3KR16 790 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 IL23RQ5VWK5 629 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 TUBA1AQ71U36 451 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 ZNF224Q9NZL3 707 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 DNAJB9Q9UBS3 223 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 SGTAO43765 313 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 C4BPAP04003 597 aaKnown RBP19.59■□□□□ 0.73
SHANK1-203ENST00000391813 MMP3P08254 477 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 CSH1P0DML2 217 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 CSH2P0DML3 217 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 CCL23P55773 120 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 OR2B6P58173 313 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 PUDPQ08623 228 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 DAG1Q14118 895 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 ACAP2Q15057 778 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 SLC25A52Q3SY17 297 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 CENPSQ8N2Z9 138 aa19.59■□□□□ 0.73
SHANK1-203ENST00000391813 CNOT6Q9ULM6 557 aaKnown RBP19.59■□□□□ 0.73
SHANK1-203ENST00000391813 MPZL2O60487 215 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 HKDC1Q2TB90 917 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 INTS6LQ5JSJ4 861 aaKnown RBP19.58■□□□□ 0.73
SHANK1-203ENST00000391813 RBM20Q5T481 1227 aaKnown RBP19.58■□□□□ 0.73
SHANK1-203ENST00000391813 ATL1Q8WXF7 558 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 C18orf25Q96B23 403 aaPredicted RBP19.58■□□□□ 0.73
SHANK1-203ENST00000391813 ITPKCQ96DU7 683 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 CHCHD6Q9BRQ6 235 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 TPK1Q9H3S4 243 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 ANKHQ9HCJ1 492 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 ZSCAN32Q9NX65 697 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 FFAR3O14843 346 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 GPR42O15529 346 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 WNT3AP56704 352 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 MOGSQ13724 837 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 TLDC1Q6P9B6 456 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 C1GALT1C1Q96EU7 318 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 MED8Q96G25 268 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 SENP8Q96LD8 212 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 GPR20Q99678 358 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 MED28Q9H204 178 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 CDT1Q9H211 546 aa19.58■□□□□ 0.73
SHANK1-203ENST00000391813 NOTOA8MTQ0 251 aa19.58■□□□□ 0.72
SHANK1-203ENST00000391813 TOR1BO14657 336 aa19.58■□□□□ 0.72
SHANK1-203ENST00000391813 CATP04040 527 aaKnown RBP19.58■□□□□ 0.72
SHANK1-203ENST00000391813 FGF1P05230 155 aa19.58■□□□□ 0.72
SHANK1-203ENST00000391813 YWHAQP27348 245 aa19.58■□□□□ 0.72
SHANK1-203ENST00000391813 STARD3Q14849 445 aa19.58■□□□□ 0.72
SHANK1-203ENST00000391813 TMEM214Q6NUQ4 689 aaKnown RBP19.58■□□□□ 0.72
SHANK1-203ENST00000391813 FAM124BQ9H5Z6 455 aaPredicted RBP19.58■□□□□ 0.72
SHANK1-203ENST00000391813 CCDC85CA6NKD9 419 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 YES1P07947 543 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 ENTPD1P49961 510 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 LCP2Q13094 533 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 BOP1Q14137 746 aaKnown RBP19.57■□□□□ 0.72
SHANK1-203ENST00000391813 ANXA8L1Q5VT79 327 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 CES5AQ6NT32 575 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 GLOD4Q9HC38 313 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 MTRRQ9UBK8 725 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 POLR3HQ9Y535 204 aaPredicted RBP19.57■□□□□ 0.72
SHANK1-203ENST00000391813 TOPAZ1Q8N9V7 1692 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 EFCAB9A8MZ26 197 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 ATF6P18850 670 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 ABHD15Q6UXT9 468 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 GALNT5Q7Z7M9 940 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 MARVELD2Q8N4S9 558 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 AGAP2Q99490 1192 aa19.57■□□□□ 0.72
SHANK1-203ENST00000391813 KIFC1Q9BW19 673 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 360.5 ms