RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PLCB2Q00722 1185 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FLI1Q01543 452 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 AKAP17AQ02040 695 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF177Q13360 481 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MADCAM1Q13477 382 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TEAD2Q15562 447 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TSC22D1Q15714 1073 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SYDE2Q5VT97 1194 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3GQ6DHY5 549 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SLFN12LQ6IEE8 588 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3CQ6IPX1 549 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PTRH1Q86Y79 214 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TGIF2LYQ8IUE0 185 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBC1D3Q8IZP1 549 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SIRT6Q8N6T7 355 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 USP38Q8NB14 1042 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 NEIL3Q8TAT5 605 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TMEM163Q8TC26 289 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FBF1Q8TES7 1133 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GATAD2BQ8WXI9 593 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ATG4AQ8WYN0 398 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MTBPQ96DY7 904 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 EGLN2Q96KS0 407 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF597Q96LX8 424 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RNF145Q96MT1 663 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 LRFN5Q96NI6 719 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CITED4Q96RK1 184 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CHCHD5Q9BSY4 110 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ANGPTL4Q9BY76 406 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PLA2G2FQ9BZM2 168 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SEMA6AQ9H2E6 1030 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KLHL31Q9H511 634 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 UPF2Q9HAU5 1272 aaKnown RBP-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 UBN1Q9NPG3 1134 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SPHK2Q9NRA0 654 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 LPAR3Q9UBY5 353 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 APEX2Q9UBZ4 518 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 IL20RAQ9UHF4 553 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ANGPTL2Q9UKU9 493 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PCDHA3Q9Y5H8 950 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 AKAP9Q99996 3911 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SPG11Q96JI7 2443 aa-2.31□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TARSL2A2RTX5 802 aaKnown RBP-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FAM90A18PA6NE21 464 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FAM90A16PA6NEW6 464 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FAM90A9PA6NNJ1 464 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FAM90A5PA8MXJ8 464 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 C2CD4DB7Z1M9 353 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 C4orf51C9J302 202 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TMX2-CTNND1H3BSU7 103 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CHL1O00533 1208 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KCNK3O14649 394 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 AHCYL1O43865 530 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RAD21O60216 631 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 EFCAB14O75071 495 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TIPRLO75663 272 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ACTL6BO94805 426 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 BPNT1O95861 308 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TBX18O95935 607 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CH25HO95992 272 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 F13A1P00488 732 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 APPP05067 770 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FAM90A15PP0C7V4 464 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FAM90A14PP0C7W9 464 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 HRES1P13985 223 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MPSTP25325 297 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 LONP1P36776 959 aaKnown RBP-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RPS9P46781 194 aaKnown RBP-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KCNJ10P78508 379 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PIGFQ07326 219 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF616Q08AN1 781 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ZNF154Q13106 437 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MYBPC2Q14324 1141 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 OASLQ15646 514 aaKnown RBP-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CNGA2Q16280 664 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ALKBH2Q6NS38 261 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 DPY19L3Q6ZPD9 716 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PTCHD4Q6ZW05 846 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SLC24A5Q71RS6 500 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 FAM220AQ7Z4H9 259 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 KCTD20Q7Z5Y7 419 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CATSPERDQ86XM0 798 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 CAMK1DQ8IU85 385 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 PPIL6Q8IXY8 311 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GCNT2Q8N0V5 402 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 OTUD7AQ8TE49 926 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SNX33Q8WV41 574 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RNF34Q969K3 372 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 C3orf30Q96M34 536 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TSNARE1Q96NA8 513 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SPRR2FQ96RM1 72 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 TRIB1Q96RU8 372 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MKNK1Q9BUB5 465 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 RAD21L1Q9H4I0 556 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 MTG2Q9H4K7 406 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 ALG2Q9H553 416 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 HPS4Q9NQG7 708 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 SIRT7Q9NRC8 400 aa-2.32□□□□□ -2.78
RNU6-1340P-201ENST00000384438 GPR27Q9NS67 375 aa-2.32□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms