RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ACKR2O00590 384 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 CPB1P15086 417 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 ISL1P61371 349 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 CHRNEQ04844 493 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 FOXM1Q08050 763 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 ZNF470Q6ECI4 717 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 SIGIRRQ6IA17 410 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 GLYATQ6IB77 296 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 OTOP3Q7RTS5 596 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 RALGPS2Q86X27 583 aaPredicted RBP14.9□□□□□ -0.02
CTNS-202ENST00000381870 ZDHHC17Q8IUH5 632 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 DEFB106AQ8N104 65 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 ASCC1Q8N9N2 400 aaKnown RBP14.9□□□□□ -0.02
CTNS-202ENST00000381870 ANKRD49Q8WVL7 239 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 KCNA7Q96RP8 456 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 EIF3LQ9Y262 564 aaKnown RBP14.9□□□□□ -0.02
CTNS-202ENST00000381870 BOLA1Q9Y3E2 137 aa14.9□□□□□ -0.02
CTNS-202ENST00000381870 COL11A2P13942 1736 aaPredicted RBP14.9□□□□□ -0.02
CTNS-202ENST00000381870 ERI2A8K979 691 aaKnown RBP14.89□□□□□ -0.03
CTNS-202ENST00000381870 SYCE1LA8MT33 242 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 SNX2O60749 519 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 PRSS23O95084 383 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 IQCF3P0C7M6 154 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 HGFP14210 728 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 ERCC2P18074 760 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 IMPDH1P20839 514 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 CD6P30203 668 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 GRK3P35626 688 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 CLCNKBP51801 687 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 GALNT1Q10472 559 aaPredicted RBP14.89□□□□□ -0.03
CTNS-202ENST00000381870 LAPTM5Q13571 262 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 UNC50Q53HI1 259 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 ZNF678Q5SXM1 525 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 PKN3Q6P5Z2 889 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 CCDC81Q6ZN84 652 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 ZDHHC13Q8IUH4 622 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 NPWQ8N729 165 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 MCFD2Q8NI22 146 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 AFG1LQ8WV93 481 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 TUBGCP3Q96CW5 907 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 ITCHQ96J02 903 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 NSMCE2Q96MF7 247 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 DPEP3Q9H4B8 488 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 RPAP3Q9H6T3 665 aaPredicted RBP14.89□□□□□ -0.03
CTNS-202ENST00000381870 MRM3Q9HC36 420 aaKnown RBP14.89□□□□□ -0.03
CTNS-202ENST00000381870 CNGB3Q9NQW8 809 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 SDR39U1Q9NRG7 319 aaPredicted RBP14.89□□□□□ -0.03
CTNS-202ENST00000381870 AASSQ9UDR5 926 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 INTS6Q9UL03 887 aaKnown RBP14.89□□□□□ -0.03
CTNS-202ENST00000381870 BTRCQ9Y297 605 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 A0A087WZ62 844 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 LINC00032P0C843 101 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 ACVR2AP27037 513 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 PSMB9P28065 219 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 ADORA2BP29275 332 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 AGAP9Q5VTM2 703 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 OTUD1Q5VV17 481 aaPredicted RBP14.89□□□□□ -0.03
CTNS-202ENST00000381870 IER5Q5VY09 327 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 NEK10Q6ZWH5 1172 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 FKBP9P1Q75LS8 142 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 C11orf74Q86VG3 221 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 CLYBLQ8N0X4 340 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 BEND7Q8N7W2 519 aaPredicted RBP14.89□□□□□ -0.03
CTNS-202ENST00000381870 SPATA22Q8NHS9 363 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 MCOLN3Q8TDD5 553 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 TWIST2Q8WVJ9 160 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 EXT2Q93063 718 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 TUBB1Q9H4B7 451 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 ALG9Q9H6U8 611 aa14.89□□□□□ -0.03
CTNS-202ENST00000381870 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.89□□□□□ -0.03
CTNS-202ENST00000381870 IGKV6D-21A0A0A0MT36 114 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 A0A1W2PP18 115 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 LRRC14BA6NHZ5 514 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 CCRL2O00421 344 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 ALX3O95076 343 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 LTA4HP09960 611 aaKnown RBP14.88□□□□□ -0.03
CTNS-202ENST00000381870 POLD2P49005 469 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 STAT5BP51692 787 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 ZNF181Q2M3W8 571 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 VARS2Q5ST30 1063 aaKnown RBP14.88□□□□□ -0.03
CTNS-202ENST00000381870 CCBE1Q6UXH8 406 aaPredicted RBP14.88□□□□□ -0.03
CTNS-202ENST00000381870 IQCF2Q8IXL9 164 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 SVOPQ8N4V2 548 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 FAM86B1Q8N7N1 296 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 PSD4Q8NDX1 1056 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 FAM149B1Q96BN6 582 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 BCL7BQ9BQE9 202 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 FEM1AQ9BSK4 669 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 CARS2Q9HA77 564 aaKnown RBP14.88□□□□□ -0.03
CTNS-202ENST00000381870 INVSQ9Y283 1065 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 CAB39Q9Y376 341 aaPredicted RBP14.88□□□□□ -0.03
CTNS-202ENST00000381870 LOC105371267A0A1B0GV96 52 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 FAM92AA1XBS5 289 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 DAB1O75553 588 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 MATN4O95460 622 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 NDST3O95803 873 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 C1RP00736 705 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 JCHAINP01591 159 aa14.88□□□□□ -0.03
CTNS-202ENST00000381870 ABCB1P08183 1280 aaPredicted RBP14.88□□□□□ -0.03
CTNS-202ENST00000381870 CHRNA5P30532 468 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms