RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 DNAJB4Q9UDY4 337 aa4.29□□□□□ -1.72
SNAPC3-201ENST00000380799 FBXW11Q9UKB1 542 aa4.29□□□□□ -1.72
SNAPC3-201ENST00000380799 ZNF148Q9UQR1 794 aa4.29□□□□□ -1.72
SNAPC3-201ENST00000380799 SNX5Q9Y5X3 404 aa4.29□□□□□ -1.72
SNAPC3-201ENST00000380799 B4DGG1 531 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 RSL1D1O76021 490 aaKnown RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 RECQL5O94762 991 aaPredicted RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 SLCO2B1O94956 709 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 ZWINTO95229 277 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 TOMM40O96008 361 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 ICAM1P05362 532 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 CYC1P08574 325 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 T-ENOLP0DO92 83 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 CTSAP10619 480 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 CYP19A1P11511 503 aaPredicted RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 ERCC2P18074 760 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 CHATP28329 748 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 ATP5DP30049 168 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 AVPR1AP37288 418 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 MATR3P43243 847 aaKnown RBP eCLIP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 CCR10P46092 362 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 PPP3CCP48454 512 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 HTR6P50406 440 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 CDH12P55289 794 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 NANOS2P60321 138 aaKnown RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 GAD2Q05329 585 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 TNIP1Q15025 636 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 SNAPC1Q16533 368 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 PNLIPRP3Q17RR3 467 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 PIK3CD-AS1Q5SR53 167 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 C6orf10Q5SRN2 563 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 ANKRD54Q6NXT1 300 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 CAVIN1Q6NZI2 390 aaKnown RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 COLCA1Q6ZS62 124 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 SDCCAG8Q86SQ7 713 aaPredicted RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 IQCHQ86VS3 1027 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 SFTPA2Q8IWL1 248 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 MB21D2Q8IYB1 491 aaPredicted RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 PI4KAP1Q8N8J0 262 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 MSI2Q96DH6 328 aaKnown RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 WDR83Q9BRX9 315 aaKnown RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 RTN4RQ9BZR6 473 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 GPR88Q9GZN0 384 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 FAM234AQ9H0X4 552 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 C2orf40Q9H1Z8 148 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 HIPK2Q9H2X6 1198 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 MMP27Q9H306 513 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 DNAJC18Q9H819 358 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 OLAHQ9NV23 265 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 HAO2Q9NYQ3 351 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 WBP11Q9Y2W2 641 aaKnown RBP4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 STON1Q9Y6Q2 735 aa4.28□□□□□ -1.72
SNAPC3-201ENST00000380799 CPED1A4D0V7 1026 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 A6NNC1 897 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 MAGEB17A8MXT2 336 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 SMAD6O43541 496 aaKnown RBP4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 CHRNB1P11230 501 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 PRLRP16471 622 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 HOXC9P31274 260 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 NPY4RP50391 375 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 METAP2P50579 478 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 RAB28P51157 221 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 ARSEP51690 589 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 SREBF2Q12772 1141 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 RALGDSQ12967 914 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 HYAL4Q2M3T9 481 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 MMEL1Q495T6 779 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 CBWD6Q4V339 395 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 CBWD3Q5JTY5 395 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 C6orf163Q5TEZ5 329 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 ASPHD1Q5U4P2 390 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 SIGIRRQ6IA17 410 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 ZNF793Q6ZN11 406 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 MTSS1LQ765P7 747 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 SPATA6LQ8N4H0 392 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 TEX45Q8NA69 505 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 MSANTD4Q8NCY6 345 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 RBM15BQ8NDT2 890 aaKnown RBP4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 AGBL3Q8NEM8 1001 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 TSPAN14Q8NG11 270 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 CFAP61Q8NHU2 1237 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 GDAP1Q8TB36 358 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 SETD6Q8TBK2 473 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 GPT2Q8TD30 523 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 HDAC11Q96DB2 347 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 ZNF830Q96NB3 372 aaPredicted RBP4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 SYT17Q9BSW7 474 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 MSTO1Q9BUK6 570 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 SPATC1LQ9H0A9 340 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 SLCO5A1Q9H2Y9 848 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 KLHL31Q9H511 634 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 ESRP2Q9H6T0 727 aaKnown RBP4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 EPB41L5Q9HCM4 733 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 HACL1Q9UJ83 578 aa4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.27□□□□□ -1.73
SNAPC3-201ENST00000380799 TRAV34A0A0B4J273 112 aa4.26□□□□□ -1.73
SNAPC3-201ENST00000380799 EDDM13A0A1B0GTR0 161 aa4.26□□□□□ -1.73
SNAPC3-201ENST00000380799 A0A1W2PPC1 479 aa4.26□□□□□ -1.73
SNAPC3-201ENST00000380799 EME2A4GXA9 379 aaPredicted RBP4.26□□□□□ -1.73
SNAPC3-201ENST00000380799 TRIM64A6NGJ6 449 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms