RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 PTPRCAPQ14761 206 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 CHRNA6Q15825 494 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 ALG11Q2TAA5 492 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 INAVAQ3KP66 663 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 ATP13A5Q4VNC0 1218 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 DNAJC21Q5F1R6 531 aaKnown RBP11.82□□□□□ -0.52
PCNA-201ENST00000379143 LDLRAP1Q5SW96 308 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 TPRG1LQ5T0D9 272 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 DUPD1Q68J44 220 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 CASC4Q6P4E1 433 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 SNX20Q7Z614 316 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 PHACTR4Q8IZ21 702 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 PDIK1LQ8N165 341 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 SDR16C5Q8N3Y7 309 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 HEXDCQ8WVB3 486 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 ULK4Q96C45 1275 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 LRRC39Q96DD0 335 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 SGSM3Q96HU1 749 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 NAT9Q9BTE0 207 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 ASB8Q9H765 288 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 IL21RQ9HBE5 538 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 TRIM39Q9HCM9 518 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 SYBUQ9NX95 663 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 APOBEC3BQ9UH17 382 aaKnown RBP11.82□□□□□ -0.52
PCNA-201ENST00000379143 CNOT6Q9ULM6 557 aaKnown RBP11.82□□□□□ -0.52
PCNA-201ENST00000379143 SOX13Q9UN79 622 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 SLC17A4Q9Y2C5 497 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 MYLKQ15746 1914 aa11.82□□□□□ -0.52
PCNA-201ENST00000379143 NEMP2A6NFY4 417 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 C4orf47A7E2U8 309 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 GAPDHSO14556 408 aaPredicted RBP11.81□□□□□ -0.52
PCNA-201ENST00000379143 PIAS2O75928 621 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 ASMTLO95671 621 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 CEACAM5P06731 702 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 IVLP07476 585 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 CTSEP14091 401 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 MC4RP32245 332 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 RPL21P46778 160 aaKnown RBP11.81□□□□□ -0.52
PCNA-201ENST00000379143 ARL4CP56559 192 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 CRADDP78560 199 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 CACNG1Q06432 222 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 PEX6Q13608 980 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 ELOCQ15369 112 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 HIF1AQ16665 826 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 ZNF542PQ5EBM4 170 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 ZRANB3Q5FWF4 1079 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 PRAMEF14Q5SWL7 426 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 AFTPHQ6ULP2 937 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 CCNJLQ8IV13 435 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 HID1Q8IV36 788 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 FSTL5Q8N475 847 aaPredicted RBP11.81□□□□□ -0.52
PCNA-201ENST00000379143 DDHD1Q8NEL9 900 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 OR13J1Q8NGT2 312 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 OR2I1PQ8NGU4 316 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 GDAP1Q8TB36 358 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 SAP25Q8TEE9 199 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.81□□□□□ -0.523e-6■■■■■ 51.5
PCNA-201ENST00000379143 TSACCQ96A04 125 aaPredicted RBP11.81□□□□□ -0.52
PCNA-201ENST00000379143 SCARF2Q96GP6 870 aaPredicted RBP11.81□□□□□ -0.52
PCNA-201ENST00000379143 TTC25Q96NG3 672 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 TTC1Q99614 292 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 LRRC1Q9BTT6 524 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 L2HGDHQ9H9P8 463 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 CYP4F12Q9HCS2 524 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 FGF22Q9HCT0 170 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 TREX1Q9NSU2 369 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 SPASTQ9UBP0 616 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 CRLS1Q9UJA2 301 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 MOSPD1Q9UJG1 213 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 CSNK1G3Q9Y6M4 447 aa11.81□□□□□ -0.52
PCNA-201ENST00000379143 BPTFQ12830 3046 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 FAM237BA0A1B0GVD1 139 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 CCDC78A2IDD5 438 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 FLRT2O43155 660 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 AQP9O43315 295 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 NUAK1O60285 661 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 UGT1A9O60656 530 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 USP1O94782 785 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 POLBP06746 335 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 RALBP11234 206 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 UGT1A6P19224 532 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 UGT1A1P22309 533 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 UGT1A4P22310 534 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 DGKAP23743 735 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 UGT1A3P35503 534 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 UGT1A5P35504 534 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 PPARGP37231 505 aaPredicted RBP11.8□□□□□ -0.52
PCNA-201ENST00000379143 GRK6P43250 576 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 MRPS25P82663 173 aaKnown RBP11.8□□□□□ -0.52
PCNA-201ENST00000379143 CBLBQ13191 982 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 GTF2H3Q13889 308 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 LRP8Q14114 963 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 SHBQ15464 509 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 UAP1L1Q3KQV9 507 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 PRRT3Q5FWE3 981 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 AARS2Q5JTZ9 985 aaKnown RBP11.8□□□□□ -0.52
PCNA-201ENST00000379143 LYPLAL1Q5VWZ2 237 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 DOK6Q6PKX4 331 aa11.8□□□□□ -0.52
PCNA-201ENST00000379143 CERS6Q6ZMG9 384 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms