RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 ESRP1Q6NXG1 681 aaKnown RBP13.65□□□□□ -0.22
COL4A1-201ENST00000375820 RTL4Q6ZR62 310 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CROCCP3Q8IVE0 287 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CCDC115Q96NT0 180 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 ELAC1Q9H777 363 aaKnown RBP13.65□□□□□ -0.22
COL4A1-201ENST00000375820 CLK4Q9HAZ1 481 aaKnown RBP13.65□□□□□ -0.22
COL4A1-201ENST00000375820 PCYOX1Q9UHG3 505 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 IRAK3Q9Y616 596 aa13.65□□□□□ -0.22
COL4A1-201ENST00000375820 GLYATL1P3A0A0U1RQE8 302 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 hCG_2039718K7EN88 272 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 DRD4P21917 467 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 TGFBR2P37173 567 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 CDK9P50750 372 aaKnown RBP13.64□□□□□ -0.23
COL4A1-201ENST00000375820 HKDC1Q2TB90 917 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 RIOX2Q8IUF8 465 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 ATAD1Q8NBU5 361 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 IFNGP01579 166 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 ATXN1P54253 815 aaKnown RBP13.64□□□□□ -0.23
COL4A1-201ENST00000375820 MYBPC3Q14896 1274 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 TXNDC11Q6PKC3 985 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 MCEMP1Q8IX19 187 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 AP3S1Q92572 193 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 LENG1Q96BZ8 264 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-201ENST00000375820 C3orf14Q9HBI5 128 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 PNPLA3Q9NST1 481 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 TMCO1Q9UM00 188 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 H3BSH0 61 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 LCA5LO95447 670 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 EPHX1P07099 455 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 MATKP42679 507 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 CBX5P45973 191 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 ZNF366Q8N895 744 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 EIF1ADQ8N9N8 165 aaKnown RBP13.64□□□□□ -0.23
COL4A1-201ENST00000375820 FBXO15Q8NCQ5 510 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-201ENST00000375820 KCTD15Q96SI1 283 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-201ENST00000375820 CHRAC1Q9NRG0 131 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 MEIS2O14770 477 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 MFSD11O43934 449 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 HSPA7P48741 367 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 SATL1Q86VE3 508 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 MCFD2Q8NI22 146 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 ESAMQ96AP7 390 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 ZNF670Q9BS34 389 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 DUSP16Q9BY84 665 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 MEGF6O75095 1541 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 H3BNH8 94 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 F7P08709 466 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-201ENST00000375820 PGDP52209 483 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 POLR2JP52435 117 aaKnown RBP13.64□□□□□ -0.23
COL4A1-201ENST00000375820 GTF2BQ00403 316 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 DSC2Q02487 901 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 BNIP2Q12982 314 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 NAE1Q13564 534 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 C9orf57Q5W0N0 161 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 OTOP2Q7RTS6 562 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 NECTIN3Q9NQS3 549 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 FCF1Q9Y324 198 aaKnown RBP13.64□□□□□ -0.23
COL4A1-201ENST00000375820 CAPN8A6NHC0 703 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 GCATO75600 419 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 C1RP00736 705 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 FGBP02675 491 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 NR2F6P10588 404 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 FAM46CQ5VWP2 391 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 GLYATQ6IB77 296 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 GPR135Q8IZ08 494 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 TBX5Q99593 518 aa13.64□□□□□ -0.23
COL4A1-201ENST00000375820 RSL1D1O76021 490 aaKnown RBP13.63□□□□□ -0.23
COL4A1-201ENST00000375820 NR1H2P55055 460 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 BNC1Q01954 994 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 SWI5Q1ZZU3 235 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 SPDYCQ5MJ68 293 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 ZNF398Q8TD17 642 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 AZIN2Q96A70 460 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 GPR21Q99679 349 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 C9IYK1 514 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 GJA9P57773 515 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 KLF1Q13351 362 aaPredicted RBP13.63□□□□□ -0.23
COL4A1-201ENST00000375820 ACAP2Q15057 778 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 NAPRTQ6XQN6 538 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 AHSA2Q719I0 299 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 CHST9Q7L1S5 443 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 SNX20Q7Z614 316 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 AKAP14Q86UN6 197 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 OR5T3Q8NGG3 340 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 SPATA22Q8NHS9 363 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 CHIAQ9BZP6 476 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 PCDH18Q9HCL0 1135 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 KCNMB3Q9NPA1 279 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 FAM105AQ9NUU6 356 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 EVA1BQ9NVM1 165 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 TMEM51Q9NW97 253 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 DIP2AQ14689 1571 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
COL4A1-201ENST00000375820 C22orf31O95567 290 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 IGFBP5P24593 272 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 DNASE1L1P49184 302 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 PITRM1Q5JRX3 1037 aa13.63□□□□□ -0.23
COL4A1-201ENST00000375820 CAPN13Q6MZZ7 669 aaPredicted RBP13.63□□□□□ -0.23
COL4A1-201ENST00000375820 ZBTB2Q8N680 514 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms