RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CCDC85BQ15834 202 aaPredicted RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 TMPRSS11BQ86T26 416 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 ULK2Q8IYT8 1036 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 EBF4Q9BQW3 602 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 BDH2Q9BUT1 245 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 MMADHCQ9H3L0 296 aaPredicted RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 LEF1Q9UJU2 399 aaPredicted RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 MAGEA13PA6NCF6 341 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 SIN3BO75182 1162 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 EPORP19235 508 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 LBX1P52954 281 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 GPR180Q86V85 440 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 C7orf26Q96N11 449 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 CXCL16Q9H2A7 254 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 SUV39H2Q9H5I1 410 aa17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 MTF2Q9Y483 593 aaPredicted RBP17.86■□□□□ 0.45
PTPDC1-202ENST00000375360 C4AP0C0L4 1744 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 CACNB4O00305 520 aaPredicted RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 CLK1P49759 484 aaKnown RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 ARSIQ5FYB1 569 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 LY6G5CQ5SRR4 150 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 AP1ARQ63HQ0 302 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 CYP20A1Q6UW02 462 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 ZYG11AQ6WRX3 759 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 HOMEZQ8IX15 550 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 KRT78Q8N1N4 520 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 TIFAQ96CG3 184 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 C19orf60Q96EN9 201 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 PPM1MQ96MI6 270 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 AARSD1Q9BTE6 412 aaKnown RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 TIAM2Q8IVF5 1701 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 TRAFD1O14545 582 aaPredicted RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 OR4F21O95013 312 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 KCNH1O95259 989 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 PCCBP05166 539 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 MAGEA11P43364 429 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 RAD23AP54725 363 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 ACAP2Q15057 778 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 TAF1AQ15573 450 aaPredicted RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 RBM20Q5T481 1227 aaKnown RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 AMIGO2Q86SJ2 522 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 CAND1Q86VP6 1230 aaKnown RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 BBS7Q8IWZ6 715 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 IGSF8Q969P0 613 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 ITM2BQ9Y287 266 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 MYH9P35579 1960 aaKnown RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 C15orf38-AP3S2A0A0A6YYH1 394 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 A0A0J9YYE9 177 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 A8MUI8 341 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 SHOX2O60902 331 aaPredicted RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 ATG13O75143 517 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 NDUFS2O75306 463 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 TMEM220Q6QAJ8 160 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 ARPINQ7Z6K5 226 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 AHCYL2Q96HN2 611 aaKnown RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 PANX1Q96RD7 426 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 SPAG4Q9NPE6 437 aa17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 ZNF490Q9ULM2 529 aaPredicted RBP17.85■□□□□ 0.45
PTPDC1-202ENST00000375360 GSAPA4D1B5 854 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 HPCAL1P37235 193 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 NRIP1P48552 1158 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 PGGT1BP53609 377 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 TCEAL1Q15170 157 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 TWIST2Q8WVJ9 160 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 PYCR2Q96C36 320 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 OR52E6Q96RD3 313 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 TLR9Q9NR96 1032 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 CLDND1Q9NY35 253 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 STK39Q9UEW8 545 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 TEKT2Q9UIF3 430 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 AP4S1Q9Y587 144 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 ANKRD66B4E2M5 251 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 CLDN7O95471 211 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 IFNA14P01570 189 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 GSNP06396 782 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 RRM2P31350 389 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 PTGER3P43115 390 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 HSPA13P48723 471 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 USP46P62068 366 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 PIM3Q86V86 326 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 CLIP3Q96DZ5 547 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 ABHD8Q96I13 439 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 TCF12Q99081 682 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 CLOCKO15516 846 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 NRP2O60462 931 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 SERPINI2O75830 405 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 ESR1P03372 595 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 IL5RAQ01344 420 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 ELP6Q0PNE2 266 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 HPS6Q86YV9 775 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 ZDHHC14Q8IZN3 488 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 PHPT1Q9NRX4 125 aaPredicted RBP17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 HCSTQ9UBK5 93 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 SUFUQ9UMX1 484 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 ZNF711Q9Y462 761 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 C2orf78A6NCI8 922 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 TEX28O15482 410 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 HS6ST1O60243 411 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 SLC22A3O75751 556 aa17.84■□□□□ 0.45
PTPDC1-202ENST00000375360 RASSF9O75901 435 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms