RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 PKP3Q9Y446 797 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 TNPO3Q9Y5L0 923 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 RAI2Q9Y5P3 530 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 OAS3Q9Y6K5 1087 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 C15orf38-AP3S2A0A0A6YYH1 394 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 A0A0D9SEW6 157 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 KANSL1LA0AUZ9 987 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 TTC24A2A3L6 582 aaPredicted RBP12.15□□□□□ -0.46
UBR4-203ENST00000375225 ZNF840PA6NDX5 716 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 E7ENX8 843 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 H7C0S8 307 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 CCL22O00626 93 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 MUSKO15146 869 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 CLASP2O75122 1294 aaKnown RBP12.15□□□□□ -0.46
UBR4-203ENST00000375225 CDK14O94921 469 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 ESR1P03372 595 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 ATF6P18850 670 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 CR2P20023 1033 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 GPX3P22352 226 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 EEF1DP29692 281 aaKnown RBP12.15□□□□□ -0.46
UBR4-203ENST00000375225 SLC6A4P31645 630 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 CA8P35219 290 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 MAPK8P45983 427 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 INO80DQ53TQ3 878 aaPredicted RBP12.15□□□□□ -0.46
UBR4-203ENST00000375225 ZRANB3Q5FWF4 1079 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 LYPLAL1Q5VWZ2 237 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 CLEC6AQ6EIG7 209 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 OGFOD2Q6N063 350 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 SLC30A9Q6PML9 568 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 RNF111Q6ZNA4 994 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 ARPINQ7Z6K5 226 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 AHI1Q8N157 1196 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 PCDH20Q8N6Y1 951 aaKnown RBP12.15□□□□□ -0.46
UBR4-203ENST00000375225 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
UBR4-203ENST00000375225 KCNJ9Q92806 393 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 EME1Q96AY2 570 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 TRMT2BQ96GJ1 504 aaKnown RBP12.15□□□□□ -0.46
UBR4-203ENST00000375225 GCNAQ96QF7 691 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 MRPS26Q9BYN8 205 aaKnown RBP12.15□□□□□ -0.46
UBR4-203ENST00000375225 NUDT4Q9NZJ9 180 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 THEGQ9P2T0 379 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 SUN2Q9UH99 717 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 SLC30A1Q9Y6M5 507 aa12.15□□□□□ -0.46
UBR4-203ENST00000375225 GBF1Q92538 1859 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 PLXNA4Q9HCM2 1894 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 CAPN8A6NHC0 703 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 AQP12BA6NM10 295 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 H3BMM5 538 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 CBX4O00257 560 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 IFRD1O00458 451 aaPredicted RBP12.14□□□□□ -0.47
UBR4-203ENST00000375225 NR5A2O00482 541 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 UBFD1O14562 309 aaKnown RBP12.14□□□□□ -0.47
UBR4-203ENST00000375225 PIP5K1BO14986 540 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 ADAM12O43184 909 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 RNASEH1O60930 286 aaKnown RBP12.14□□□□□ -0.47
UBR4-203ENST00000375225 ABLIM3O94929 683 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 VNN2O95498 520 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 CAPNS1P04632 268 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 RPS17P08708 135 aaKnown RBP12.14□□□□□ -0.47
UBR4-203ENST00000375225 FCGR1AP12314 374 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 IL10P22301 178 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 MC4RP32245 332 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
UBR4-203ENST00000375225 KCNK10P57789 538 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 AP1S1P61966 158 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 SH3BP2P78314 561 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 MS4A2Q01362 244 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 CACNG1Q06432 222 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 RAB33AQ14088 237 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 MAP7Q14244 749 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 OR4D1Q15615 310 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 PTPRNQ16849 979 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 UGT3A2Q3SY77 523 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 AASDHQ4L235 1098 aaPredicted RBP12.14□□□□□ -0.47
UBR4-203ENST00000375225 LIN52Q52LA3 116 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 RNF219Q5W0B1 726 aaPredicted RBP12.14□□□□□ -0.47
UBR4-203ENST00000375225 PRR23BQ6ZRT6 265 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 FRA10AC1Q70Z53 315 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 GPSM1Q86YR5 675 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 AQP12AQ8IXF9 295 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 MINDY1Q8N5J2 469 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 HJURPQ8NCD3 748 aaPredicted RBP12.14□□□□□ -0.47
UBR4-203ENST00000375225 SHKBP1Q8TBC3 707 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 TRPC4APQ8TEL6 797 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 ZFAND2BQ8WV99 257 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 MYRFLQ96LU7 910 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 OSBPL11Q9BXB4 747 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 TRIM54Q9BYV2 358 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 TRIM4Q9C037 500 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 ZBP1Q9H171 429 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 CRISPLD1Q9H336 500 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 EPB41L1Q9H4G0 881 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 POLR3BQ9NW08 1133 aaPredicted RBP12.14□□□□□ -0.47
UBR4-203ENST00000375225 PADI4Q9UM07 663 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 DNAJC15Q9Y5T4 150 aa12.14□□□□□ -0.47
UBR4-203ENST00000375225 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.13□□□□□ -0.47
UBR4-203ENST00000375225 TCRBV3S1A0A5B6 114 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 GRXCR2A6NFK2 248 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 ANKRD66B4E2M5 251 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms