RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SMG7Q92540 1137 aaKnown RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CMTM5Q96DZ9 223 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SLC30A3Q99726 388 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 HTATIP2Q9BUP3 242 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SHCBP1LQ9BZQ2 653 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 WDR55Q9H6Y2 383 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GALPQ9UBC7 116 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SLCO3A1Q9UIG8 710 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ERVW-1Q9UQF0 538 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PRRC2BQ5JSZ5 2229 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 UBXN8O00124 270 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 KLK8O60259 260 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MAGEC1O60732 1142 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 POLR2EP19388 210 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 EPHA3P29320 983 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CPA2P48052 419 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CLCN7P51798 805 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 INHBCP55103 352 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 IL2P60568 153 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ACCSLQ4AC99 568 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TMEM215Q68D42 235 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FAM109BQ6ICB4 259 aaPredicted RBP17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ADGRD2Q7Z7M1 963 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SIDT2Q8NBJ9 832 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ITFG1Q8TB96 612 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MCUR1Q96AQ8 359 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FAM136AQ96C01 138 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PDLIM5Q96HC4 596 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TRIOBPQ9H2D6 2365 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ZDHHC6Q9H6R6 413 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ASB8Q9H765 288 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PIDD1Q9HB75 910 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GNPTGQ9UJJ9 305 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 IKZF3Q9UKT9 509 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 RNF112Q9ULX5 631 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PLA2G4CQ9UP65 541 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 DHRS7Q9Y394 339 aa17.86■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MUC22E2RYF6 1773 aaPredicted RBP17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GOLGA8QA0A0J9YX86 632 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GOLGA8OA6NCC3 632 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TMEM233B4DJY2 109 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 E5RI56 91 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GOLGA8NF8WBI6 632 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SDHDO14521 159 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GPR39O43194 453 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 HOXC11O43248 304 aaPredicted RBP17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 DCXO43602 365 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SUPT7LO94864 414 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 JUNP05412 331 aaKnown RBP17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ACRV1P26436 265 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 COPAP53621 1224 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 KLF10Q13118 480 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 DHCR24Q15392 516 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TSNQ15631 228 aaKnown RBP17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PDCD2Q16342 344 aaPredicted RBP17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 DUSP6Q16828 381 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 C9orf50Q5SZB4 431 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ZDHHC20Q5W0Z9 365 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 Q6ZVU0 165 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TSPAN33Q86UF1 283 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PHTF2Q8N3S3 785 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 OR2A12Q8NGT7 310 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 WFIKKN2Q8TEU8 576 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FRS2Q8WU20 508 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FUBP1Q96AE4 644 aaKnown RBP17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MRGPRX3Q96LB0 322 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 C1QTNF3Q9BXJ4 246 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CLPBQ9H078 707 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MEAF6Q9HAF1 191 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CEP290O15078 2479 aa17.85■□□□□ 0.45
HLA-DQB1-201ENST00000374943 STX16-NPEPL1H3BU86 382 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NEMP1O14524 444 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 STX16O14662 325 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ECI2O75521 394 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CYP17A1P05093 508 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 UGT2B4P06133 528 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CHRM3P20309 590 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CPOXP36551 454 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 RAP1GDS1P52306 607 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CBX2Q14781 532 aaPredicted RBP17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 LRRC66Q68CR7 880 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GDPD4Q6W3E5 623 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 RBM23Q86U06 439 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SUGP1Q8IWZ8 645 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CHST14Q8NCH0 376 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FBXO27Q8NI29 283 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ACTRT2Q8TDY3 377 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 OSCP1Q8WVF1 389 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 EXT2Q93063 718 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 LINGO1Q96FE5 620 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 LRRC3BQ96PB8 259 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 OSBPL1AQ9BXW6 950 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 LMAN2LQ9H0V9 348 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TNFRSF12AQ9NP84 129 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MRGBPQ9NV56 204 aa17.84■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TSPAN11A1L157 253 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NPEPPSL1A6NEC2 478 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SUPT3HB4E1H0 165 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CDC7O00311 574 aa17.83■□□□□ 0.45
HLA-DQB1-201ENST00000374943 BTN3A1O00481 513 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms