RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 MTAPQ13126 283 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 FGL2Q14314 439 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 RBM20Q5T481 1227 aaKnown RBP17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 GPRC6AQ5T6X5 926 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 FAM45BPQ6NSW5 357 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 ZNF549Q6P9A3 640 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 ADAMTSL4Q6UY14 1074 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 SRRM1Q8IYB3 904 aaKnown RBP17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 CAMKK1Q8N5S9 505 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 PNPLA1Q8N8W4 532 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 ACVR1CQ8NER5 493 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 FAM45AQ8TCE6 357 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 ALKBH8Q96BT7 664 aaKnown RBP17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 ATXN7L3BQ96GX2 97 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 SERAC1Q96JX3 654 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 BIRC8Q96P09 236 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 AARSD1Q9BTE6 412 aaKnown RBP17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 BTBD1Q9H0C5 482 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 SNX15Q9NRS6 342 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 PCDHB1Q9Y5F3 818 aa17.08■□□□□ 0.32
HLA-DMA-201ENST00000374843 A0A1W2PPM1 405 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 LRRC72A6NJI9 287 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 FOXO6A8MYZ6 492 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 PRMT5O14744 637 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 ZNF217O75362 1048 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 WISP3O95389 354 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 ZNF7P17097 686 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 FDXRP22570 491 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 OAS2P29728 719 aaKnown RBP17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 PPP2CBP62714 309 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 PPP2CAP67775 309 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 SETMARQ53H47 684 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 CTSL3PQ5NE16 218 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 HECTD2Q5U5R9 776 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 CCDC91Q7Z6B0 441 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 TP53I13Q8NBR0 393 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 DENND6BQ8NEG7 585 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 HEXDCQ8WVB3 486 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 BTN2A2Q8WVV5 523 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 GLYATL1Q969I3 302 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 UHRF1Q96T88 793 aaPredicted RBP17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 COPS8Q99627 209 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 C1QTNF7Q9BXJ2 289 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 POPDC3Q9HBV1 291 aa17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 CNOT6Q9ULM6 557 aaKnown RBP17.07■□□□□ 0.32
HLA-DMA-201ENST00000374843 H3BMM5 538 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 STK25O00506 426 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 PRPF4O43172 522 aaKnown RBP eCLIP17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 LATO43561 262 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 OR1I1O60431 355 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 SEMA4FO95754 770 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 DCNP07585 359 aaKnown RBP17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 PKMP14618 531 aaKnown RBP17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 AOC1P19801 751 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 ACSL1P33121 698 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 NSG1P42857 185 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 CCR3P51677 355 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 B4GALNT1Q00973 533 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 USP10Q14694 798 aaKnown RBP17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 WSCD2Q2TBF2 565 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 LDLRAP1Q5SW96 308 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 MACC1Q6ZN28 852 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 PHYKPLQ8IUZ5 450 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 SLC41A1Q8IVJ1 513 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 PELI3Q8N2H9 469 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 GPATCH11Q8N954 259 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 KCNJ9Q92806 393 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 TSPAN17Q96FV3 270 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 APOPT1Q96IL0 206 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 ELMO2Q96JJ3 720 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 CABS1Q96KC9 395 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 SMC6Q96SB8 1091 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 NDNQ99608 321 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 OLFM1Q99784 485 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 SLC39A10Q9ULF5 831 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 CRYL1Q9Y2S2 319 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 MED16Q9Y2X0 877 aa17.06■□□□□ 0.32
HLA-DMA-201ENST00000374843 UBA6A0AVT1 1052 aaPredicted RBP17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 GOLGA8CPA6NN73 597 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 K7ESF4 209 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 K7ESM1 405 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 TYROBPO43914 113 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 PDGFBP01127 241 aaPredicted RBP17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 MPOP05164 745 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 CREB1P16220 341 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 KRT4P19013 534 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 NR1D1P20393 614 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 CRABP2P29373 138 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 HOXA6P31267 233 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 CCR5P51681 352 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 SLC18A1P54219 525 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 CDKN2DP55273 166 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 TAS2R39P59534 338 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 RAB10P61026 200 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 TIAL1Q01085 375 aaKnown RBP eCLIP17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 LRRC14Q15048 493 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 IRF4Q15306 451 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 RAET1GQ6H3X3 334 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 CMC1Q7Z7K0 106 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms