RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 GRAMD1AQ96CP6 724 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 HPDLQ96IR7 371 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 MAGEB18Q96M61 343 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 TBCBQ99426 244 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 ADPGKQ9BRR6 497 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 C16orf70Q9BSU1 422 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CNPY3Q9BT09 278 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 ALG8Q9BVK2 526 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 FRMD8Q9BZ67 464 aaPredicted RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 SYNCQ9H7C4 482 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 PLEKHA5Q9HAU0 1116 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 GBA2Q9HCG7 927 aaPredicted RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 KLC4Q9NSK0 619 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 DNAJC17Q9NVM6 304 aaKnown RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 ASNSD1Q9NWL6 643 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 DPP3Q9NY33 737 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 NKIRAS1Q9NYS0 192 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CTNNAL1Q9UBT7 734 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 ZMYND8Q9ULU4 1186 aaPredicted RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 AGAP1Q9UPQ3 857 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 NAALADL1Q9UQQ1 740 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 ZNF638Q14966 1978 aaKnown RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 DOCK3Q8IZD9 2030 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 TSC2P49815 1807 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 CFAP69A5D8W1 941 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 CFAP73A6NFT4 308 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 RRN3P2A6NIE6 340 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 TCP11X1B4DZS4 312 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 RASA4BC9J798 803 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 DNM1LO00429 736 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 RASA4O43374 803 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 TRIAP1O43715 76 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 SPAG6O75602 509 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 RASSF9O75901 435 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 SNAI1O95863 264 aaPredicted RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 VTNP04004 478 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 CHRM2P08172 466 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 MMP3P08254 477 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 VIMP08670 466 aaKnown RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 ZSCAN5DPP0CG00 497 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ETS1P14921 441 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 CREB1P16220 341 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 CYP3A5P20815 502 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 TGM2P21980 687 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 LMO1P25800 156 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 STX2P32856 288 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 EPHX2P34913 555 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 RPL22P35268 128 aaKnown RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 MAGEA6P43360 314 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 IFNAR2P48551 515 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 RPL34P49207 117 aaKnown RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 CTCFP49711 727 aaPredicted RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 NDST1P52848 882 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ARL4CP56559 192 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 SNX16P57768 344 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 EIF3EP60228 445 aaKnown RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 IL9RQ01113 521 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 FOXF2Q12947 444 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 PDIA2Q13087 525 aaKnown RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 NOGQ13253 232 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ACVR2BQ13705 512 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 GRB14Q14449 540 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 FASTKD3Q14CZ7 662 aaKnown RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 PDK2Q15119 407 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 TMED2Q15363 201 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ZBTB6Q15916 424 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 SMTNL2Q2TAL5 461 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 KLHL38Q2WGJ6 581 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 DUSP28Q4G0W2 176 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ARHGAP17Q68EM7 881 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 FAM183BPQ6ZVS7 135 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 CYP4V2Q6ZWL3 525 aaPredicted RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 ARCQ7LC44 396 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 TRPM8Q7Z2W7 1104 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ANKRD23Q86SG2 305 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 PRUNE1Q86TP1 453 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 UNC93AQ86WB7 457 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 RFX6Q8HWS3 928 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ZDHHC17Q8IUH5 632 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ZBED8Q8IZ13 594 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 EMC1Q8N766 993 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 GBP7Q8N8V2 638 aaPredicted RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 ANKRD42Q8N9B4 389 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ATP11CQ8NB49 1132 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 DENND1AQ8TEH3 1009 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 HAUS1Q96CS2 278 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 FAF2Q96CS3 445 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ZBTB10Q96DT7 871 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 RTP4Q96DX8 246 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 CPB2Q96IY4 423 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ZNF668Q96K58 619 aaPredicted RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 SNX27Q96L92 541 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 PEBP4Q96S96 227 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 TSPAN18Q96SJ8 248 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ELAC2Q9BQ52 826 aaKnown RBP4.89□□□□□ -1.63
USP48-202ENST00000374730 TMEM121Q9BTD3 319 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ABHD16BQ9H3Z7 469 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 TRABDQ9H4I3 376 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 ZWILCHQ9H900 591 aa4.89□□□□□ -1.63
USP48-202ENST00000374730 HAUS2Q9NVX0 235 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms