RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 EFHD1Q9BUP0 239 aa13.64□□□□□ -0.23
CXCL12-202ENST00000374426 TBC1D10AQ9BXI6 508 aa13.64□□□□□ -0.23
CXCL12-202ENST00000374426 FAM83DQ9H4H8 585 aa13.64□□□□□ -0.23
CXCL12-202ENST00000374426 STN1Q9H668 368 aaKnown RBP13.64□□□□□ -0.23
CXCL12-202ENST00000374426 PCDH9Q9HC56 1237 aa13.64□□□□□ -0.23
CXCL12-202ENST00000374426 SIDT1Q9NXL6 827 aaKnown RBP13.64□□□□□ -0.23
CXCL12-202ENST00000374426 CPNE7Q9UBL6 633 aa13.64□□□□□ -0.23
CXCL12-202ENST00000374426 IP6K2Q9UHH9 426 aa13.64□□□□□ -0.23
CXCL12-202ENST00000374426 AMACRQ9UHK6 382 aa13.64□□□□□ -0.23
CXCL12-202ENST00000374426 RPL26L1Q9UNX3 145 aaKnown RBP13.64□□□□□ -0.23
CXCL12-202ENST00000374426 MN1Q10571 1320 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-202ENST00000374426 C1orf232A0A0U1RR37 186 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 A0A1B0GTH6 734 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 CLEC18AA5D8T8 446 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 LILRA5A6NI73 299 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 POLR1CO15160 346 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-202ENST00000374426 NUAK1O60285 661 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 HLA-DQB2P05538 268 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 CCNCP24863 283 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 STAT5AP42229 794 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 UBE2IP63279 158 aaKnown RBP13.63□□□□□ -0.23
CXCL12-202ENST00000374426 UBAP2LQ14157 1087 aaKnown RBP13.63□□□□□ -0.23
CXCL12-202ENST00000374426 QPCTQ16769 361 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 DEFB109BQ30KR1 87 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 ANO6Q4KMQ2 910 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 FILIP1LQ4L180 1135 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 ATP13A4Q4VNC1 1196 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 CCDC183Q5T5S1 534 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 TIGD7Q6NT04 549 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-202ENST00000374426 CLEC18BQ6UXF7 455 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 KDELC2Q7Z4H8 507 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 CLEC18CQ8NCF0 446 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 BPIFA3Q9BQP9 254 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 NUP85Q9BW27 656 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-202ENST00000374426 TRIT1Q9H3H1 467 aaKnown RBP13.63□□□□□ -0.23
CXCL12-202ENST00000374426 EPB41L1Q9H4G0 881 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 RMI1Q9H9A7 625 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 PRDM8Q9NQV8 689 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 OGFRQ9NZT2 677 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 ADGRG1Q9Y653 693 aa13.63□□□□□ -0.23
CXCL12-202ENST00000374426 MRPS18BQ9Y676 258 aaKnown RBP13.63□□□□□ -0.23
CXCL12-202ENST00000374426 GRID2O43424 1007 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 CYP1A2P05177 515 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 MMP2P08253 660 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 ANKRD34CP0C6C1 535 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 SLC2A4P14672 509 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 ZNF8P17098 575 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-202ENST00000374426 TCN2P20062 427 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 CA4P22748 312 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 F8A1P23610 371 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 GFERP55789 205 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 MC1RQ01726 317 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 IFI16Q16666 785 aaKnown RBP13.62□□□□□ -0.23
CXCL12-202ENST00000374426 CRTC2Q53ET0 693 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-202ENST00000374426 TDRD12Q587J7 1177 aaKnown RBP13.62□□□□□ -0.23
CXCL12-202ENST00000374426 ANKRD20A8PQ5CZ79 823 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 C16orf46Q6P387 395 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 CPNE8Q86YQ8 564 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 PLXDC1Q8IUK5 500 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 PHYKPLQ8IUZ5 450 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 ESX1Q8N693 406 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 EID2BQ96D98 161 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 RNF31Q96EP0 1072 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 PLEKHG4BQ96PX9 1271 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 NAT10Q9H0A0 1025 aaKnown RBP13.62□□□□□ -0.23
CXCL12-202ENST00000374426 CARD9Q9H257 536 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 ARFGAP3Q9NP61 516 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 PKD2L2Q9NZM6 624 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 SCHIP1Q9P0W5 487 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-202ENST00000374426 ATXN10Q9UBB4 475 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 RPS6KL1Q9Y6S9 549 aa13.62□□□□□ -0.23
CXCL12-202ENST00000374426 UNC79Q9P2D8 2635 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 OR5K4A6NMS3 321 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 ANKRD66B4E2M5 251 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 MYO1FO00160 1098 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 C9P02748 559 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 ZNF28P17035 718 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 GJC1P36383 396 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 SSR1P43307 286 aaKnown RBP13.61□□□□□ -0.23
CXCL12-202ENST00000374426 CLCNKAP51800 687 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 GBE1Q04446 702 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 SLC10A2Q12908 348 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-202ENST00000374426 MAP7Q14244 749 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 LACTB2Q53H82 288 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-202ENST00000374426 FIGNQ5HY92 759 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 ZNF648Q5T619 568 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-202ENST00000374426 AVL9Q8NBF6 648 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 CCHCR1Q8TD31 782 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 C9orf72Q96LT7 481 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 GBP4Q96PP9 640 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 ZNF670Q9BS34 389 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 MLPHQ9BV36 600 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-202ENST00000374426 ULBP3Q9BZM4 244 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 OR2AG1Q9H205 316 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 UCK1Q9HA47 277 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 KLC4Q9NSK0 619 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 HAUS2Q9NVX0 235 aa13.61□□□□□ -0.23
CXCL12-202ENST00000374426 DTLQ9NZJ0 730 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms