RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 SMYD4Q8IYR2 804 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 TMEM102Q8N9M5 508 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 C1orf131Q8NDD1 294 aaKnown RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 HCAR2Q8TDS4 363 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 NT5C3BQ969T7 300 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 METTL14Q9HCE5 456 aaKnown RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 GOLGA6AQ9NYA3 693 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 PPARGC1AQ9UBK2 798 aaKnown RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 TCFL5Q9UL49 500 aa12.08□□□□□ -0.48
HDAC8-204ENST00000373560 RPH3AQ9Y2J0 694 aaPredicted RBP12.08□□□□□ -0.48
HDAC8-204ENST00000373560 NBEAL1Q6ZS30 2694 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 SNX2O60749 519 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 RAMP2O60895 175 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 CAPN1P07384 714 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 EBLN1P0CF75 366 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 KRT5P13647 590 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 LHCGRP22888 699 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 TDGF1P3P51864 188 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 UBE2IP63279 158 aaKnown RBP12.07□□□□□ -0.48
HDAC8-204ENST00000373560 C4orf48Q5BLP8 95 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 CFAP58Q5T655 872 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 CACHD1Q5VU97 1274 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 RAET1GQ6H3X3 334 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 RWDD4Q6NW29 188 aaKnown RBP12.07□□□□□ -0.48
HDAC8-204ENST00000373560 FAM198BQ6UWH4 519 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 TAOK1Q7L7X3 1001 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 CXXC5Q7LFL8 322 aaKnown RBP12.07□□□□□ -0.48
HDAC8-204ENST00000373560 PRSS42Q7Z5A4 293 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 ZNF354CQ86Y25 554 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 DNAAF5Q86Y56 855 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 KLHL6Q8WZ60 621 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 ECHDC3Q96DC8 303 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 PGAP3Q96FM1 320 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-204ENST00000373560 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 MLPHQ9BV36 600 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-204ENST00000373560 SCAND2PQ9GZW5 306 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-204ENST00000373560 MAGEH1Q9H213 219 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 TMEM248Q9NWD8 314 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 SCHIP1Q9P0W5 487 aaPredicted RBP12.07□□□□□ -0.48
HDAC8-204ENST00000373560 CNOT8Q9UFF9 292 aaKnown RBP12.07□□□□□ -0.48
HDAC8-204ENST00000373560 SH3BGRL2Q9UJC5 107 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 CNTN6Q9UQ52 1028 aa12.07□□□□□ -0.48
HDAC8-204ENST00000373560 IGHV5-51A0A0C4DH38 117 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 CCDC78A2IDD5 438 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 SIAH2O43255 324 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 JRKO75564 520 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 C8BP07358 591 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 NELFEP18615 380 aaKnown RBP12.06□□□□□ -0.48
HDAC8-204ENST00000373560 GNA15P30679 374 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 FLT3P36888 993 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 ETFBP38117 255 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 MAPKAPK2P49137 400 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 FMO5P49326 533 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 FOXL2P58012 376 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 SLC6A3Q01959 620 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 MYBPC3Q14896 1274 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 MEA1Q16626 185 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 SKOR2Q2VWA4 1001 aaPredicted RBP12.06□□□□□ -0.48
HDAC8-204ENST00000373560 BNIPLQ7Z465 357 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 CEP97Q8IW35 865 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 ZADH2Q8N4Q0 377 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 ZNF397Q8NF99 534 aaPredicted RBP12.06□□□□□ -0.48
HDAC8-204ENST00000373560 HDAC11Q96DB2 347 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 DTD2Q96FN9 168 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 SGSM3Q96HU1 749 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 GTPBP4Q9BZE4 634 aaKnown RBP12.06□□□□□ -0.48
HDAC8-204ENST00000373560 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDAC8-204ENST00000373560 CPNE7Q9UBL6 633 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 CD84Q9UIB8 345 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 RARRES3Q9UL19 164 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 HPCAL4Q9UM19 191 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 MTMR6Q9Y217 621 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 DOCK10Q96BY6 2186 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 JMJD1CQ15652 2540 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 STAB1Q9NY15 2570 aa12.06□□□□□ -0.48
HDAC8-204ENST00000373560 TRGV8A0A0C4DH27 118 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 FAM221AA4D161 298 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 CCL21O00585 134 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 UBXN7O94888 489 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 RHOQP17081 205 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 SYT1P21579 422 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 IST1P53990 364 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 PEX6Q13608 980 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 RESP18Q5W5W9 173 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 Q6ZVL8 140 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 NCCRP1Q6ZVX7 275 aaPredicted RBP12.05□□□□□ -0.48
HDAC8-204ENST00000373560 CHST15Q7LFX5 561 aaPredicted RBP12.05□□□□□ -0.48
HDAC8-204ENST00000373560 MRGPREQ86SM8 312 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 SLC9B2Q86UD5 537 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 GALNT13Q8IUC8 556 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 GALNT16Q8N428 558 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 SPATA3Q8NHX4 192 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 CHTF18Q8WVB6 975 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 CFAP57Q96MR6 1250 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 ZNF641Q96N77 438 aaPredicted RBP12.05□□□□□ -0.48
HDAC8-204ENST00000373560 PLEKHG4BQ96PX9 1271 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 AGAP2Q99490 1192 aa12.05□□□□□ -0.48
HDAC8-204ENST00000373560 WDR77Q9BQA1 342 aaPredicted RBP12.05□□□□□ -0.48
HDAC8-204ENST00000373560 PLCB1Q9NQ66 1216 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms