RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 GSTK1Q9Y2Q3 226 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 RAP2CQ9Y3L5 183 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZMPSTE24O75844 475 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 PAICSP22234 425 aaKnown RBP13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 ATP5F1P24539 256 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 HTR7P34969 479 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 PLK1P53350 603 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 SEC13P55735 322 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZMYND11Q15326 602 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC10A6Q3KNW5 377 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 FGD3Q5JSP0 725 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 DUS1LQ6P1R4 473 aaKnown RBP13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 RFWD3Q6PCD5 774 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 IL27RAQ6UWB1 636 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 IQCKQ8N0W5 287 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 FBXO30Q8TB52 745 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 HEXDCQ8WVB3 486 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 MARK4Q96L34 752 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 TMEM175Q9BSA9 504 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC35C2Q9NQQ7 365 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 LEF1Q9UJU2 399 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC27A6Q9Y2P4 619 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZFP37Q9Y6Q3 630 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 NRP1O14786 923 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SSNA1O43805 119 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 NUDT7P0C024 238 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 RHOQP17081 205 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 TLX1P31314 330 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 GRIA4P48058 902 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 CDH4P55283 916 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 GAD2Q05329 585 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC9A4Q6AI14 798 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 DNAJC14Q6Y2X3 702 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 ALYREFQ86V81 257 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC22A8Q8TCC7 542 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 CNDP2Q96KP4 475 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 GMLQ99445 158 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 EPB41L4BQ9H329 900 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 XPNPEP1Q9NQW7 623 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 PCDHGC3Q9UN70 934 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 FSCN2O14926 492 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 PER2O15055 1255 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 NOL4O94818 638 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 FYNP06241 537 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 ELP6Q0PNE2 266 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SPIDRQ14159 915 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 MSANTD1Q6ZTZ1 278 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 TRABD2AQ86V40 505 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 LRRN4Q8WUT4 740 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 MYDGFQ969H8 173 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 RERGQ96A58 199 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC4A5Q9BY07 1137 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 C3orf18Q9UK00 162 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 TBC1D30Q9Y2I9 924 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 GPC6Q9Y625 555 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 CPQQ9Y646 472 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 C5orf51A6NDU8 294 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 PLOD2O00469 737 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 RNASEH2AO75792 299 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 PRNPP04156 253 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SRP54P61011 504 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 IRF8Q02556 426 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 DPYSQ14117 519 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZNF425Q6IV72 752 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 FAM151BQ6UXP7 276 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 UNC5AQ6ZN44 842 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 POC5Q8NA72 575 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC4A11Q8NBS3 891 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 DQX1Q8TE96 717 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZNF296Q8WUU4 475 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 DPF1Q92782 380 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 BORCS5Q969J3 196 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 NUDT16L1Q9BRJ7 211 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 TBCDQ9BTW9 1192 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 UNC93B1Q9H1C4 597 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 ABCG8Q9H221 673 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 LOC100506127A0A0U1RQW1 187 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 VILLO15195 856 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 PFKMP08237 780 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 HSD3B2P26439 372 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 STX4Q12846 297 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 ABRQ12979 859 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 PERM1Q5SV97 790 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SCAIQ8N9R8 606 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 OR4L1Q8NH43 312 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 EPB41L1Q9H4G0 881 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 RCOR3Q9P2K3 495 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 RBMX2Q9Y388 322 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 UBXN8O00124 270 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SHOX2O60902 331 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SLC10A3P09131 477 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 MMP8P22894 467 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 DNAJA1P31689 397 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 MC4RP32245 332 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZSWIM7Q19AV6 140 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 KCTD15Q96SI1 283 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-201ENST00000372189 SEMA4BQ9NPR2 832 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms