RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 COMTD1Q86VU5 262 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 OR14K1Q8NGZ2 314 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 MFSD8Q8NHS3 518 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 SMURF2Q9HAU4 748 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 KIAA0556O60303 1618 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 CYP3A7-CYP3A51PA0A087WV96 503 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 CYP3A7P24462 503 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 EFEMP1Q12805 493 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 NAE1Q13564 534 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 TIGD2Q4W5G0 525 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 BRMS1LQ5PSV4 323 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 DCST1Q5T197 706 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 TAS1R2Q8TE23 839 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 LPAR1Q92633 364 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 NXPE2Q96DL1 559 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 CELF6Q96J87 481 aaKnown RBP15.19■□□□□ 0.02
COL5A1-201ENST00000371817 ERVK-5Q9HDB9 667 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 CFAP97Q9P2B7 532 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 TCRBV9S1A1TA0A576 114 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 GTPBP1O00178 669 aaKnown RBP15.19■□□□□ 0.02
COL5A1-201ENST00000371817 HTR2BP41595 481 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 LHX1P48742 406 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 SLC12A3P55017 1021 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 HUNKP57058 714 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 DLG2Q15700 870 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 ADGRD2Q7Z7M1 963 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 TEX19Q8NA77 164 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF225Q9UK10 706 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 TSPAN8P19075 237 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 KDELR1P24390 212 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 TMEM192Q8IY95 271 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 PNPOQ9NVS9 261 aa15.19■□□□□ 0.02
COL5A1-201ENST00000371817 SUCOQ9UBS9 1254 aaKnown RBP15.19■□□□□ 0.02
COL5A1-201ENST00000371817 LIASO43766 372 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 OR10H2O60403 315 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 MANFP55145 182 aaKnown RBP15.18■□□□□ 0.02
COL5A1-201ENST00000371817 GIT2Q14161 759 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 GHDCQ8N2G8 530 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 SPATA20Q8TB22 786 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 PMM1Q92871 262 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 ROPN1LQ96C74 230 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 MIPEPQ99797 713 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 KCNH7Q9NS40 1196 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 POLR3HQ9Y535 204 aaPredicted RBP15.18■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF780BQ9Y6R6 833 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 ZSCAN5DPP0CG00 497 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 TFAP2DQ7Z6R9 452 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 DAGLBQ8NCG7 672 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 BPNT1O95861 308 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 BPGMP07738 259 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 CYP3A4P08684 503 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 CLK3P49761 638 aaKnown RBP15.18■□□□□ 0.02
COL5A1-201ENST00000371817 GRB10Q13322 594 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 FAM91A1Q658Y4 838 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 TIGD4Q8IY51 512 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF606Q8WXB4 792 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 RBAK-RBAKDNI3L0D1 243 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 HBP1O60381 514 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 B3GAT3O94766 335 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 EPCAMP16422 314 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 PCDH1Q08174 1060 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 TOR1AIP1Q5JTV8 583 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 OMDQ99983 421 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 TCF7L1Q9HCS4 588 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 ERVK-11Q9UQG0 969 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 PCDHGA11Q9Y5H2 935 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 CYB561D2O14569 222 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 CSN2P05814 226 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 KCNA5P22460 613 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 MIPP30301 263 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 SSX2Q16385 188 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 METTL21CQ5VZV1 264 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 ZNF720Q7Z2F6 126 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 OR2L8Q8NGY9 312 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 TUBA1CQ9BQE3 449 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 MRPL9Q9BYD2 267 aaKnown RBP15.18■□□□□ 0.02
COL5A1-201ENST00000371817 C11orf16Q9NQ32 467 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 SLC37A4O43826 429 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 SPP2Q13103 211 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 USP21Q9UK80 565 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 FPGTO14772 594 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 GIMD1P0DJR0 217 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 DNASE1L1P49184 302 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 FNTBP49356 437 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 SNAP47Q5SQN1 464 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 CPTPQ5TA50 214 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 MFSD14CQ5VZR4 134 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 ASB18Q6ZVZ8 466 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 PLEKHA6Q9Y2H5 1048 aa15.18■□□□□ 0.02
COL5A1-201ENST00000371817 H0YJX3 145 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 CABYRO75952 493 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 MICAL2O94851 1124 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 IFNA2P01563 188 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 XKR6Q5GH73 641 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 TAPT1Q6NXT6 567 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 ANKRD23Q86SG2 305 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 RALGPS2Q86X27 583 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-201ENST00000371817 GPR156Q8NFN8 814 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 ABCD2Q9UBJ2 740 aa15.17■□□□□ 0.02
COL5A1-201ENST00000371817 SAMD9LQ8IVG5 1584 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms