RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 BHMTQ93088 406 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 PPP1R36Q96LQ0 422 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 PRPF18Q99633 342 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 LRRC3Q9BY71 257 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 C11orf49Q9H6J7 331 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 CYP4F12Q9HCS2 524 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 NCKIPSDQ9NZQ3 722 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 DNMT3BQ9UBC3 853 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 PLXNA4Q9HCM2 1894 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 TMEM233B4DJY2 109 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 ANKRD66B4E2M5 251 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 FBP2O00757 339 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 DCXO43602 365 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 IPO13O94829 963 aaKnown RBP12.75□□□□□ -0.37
GPC3-201ENST00000370818 MT-CO1P00395 513 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 SLC4A1P02730 911 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 RBP1P09455 135 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 GABRR2P28476 465 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 EPHA3P29320 983 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 PPM1AP35813 382 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 CSKP41240 450 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 SUOXP51687 545 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 HK2P52789 917 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 TGFBIQ15582 683 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 INO80DQ53TQ3 878 aaPredicted RBP12.75□□□□□ -0.37
GPC3-201ENST00000370818 METTL21CQ5VZV1 264 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 NCEH1Q6PIU2 408 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 ELMSAN1Q6PJG2 1045 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 TMC8Q8IU68 726 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 GPR65Q8IYL9 337 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 HS6ST3Q8IZP7 471 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 NUF2Q9BZD4 464 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 LIN28AQ9H9Z2 209 aaKnown RBP12.75□□□□□ -0.37
GPC3-201ENST00000370818 VPS51Q9UID3 782 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 VPS28Q9UK41 221 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 APPL1Q9UKG1 709 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 MED16Q9Y2X0 877 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 KIAA0355O15063 1070 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 EFCAB14O75071 495 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 CTSAP10619 480 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 HNRNPLP14866 589 aaKnown RBP eCLIP12.75□□□□□ -0.371e-7■■■□□ 15.8
GPC3-201ENST00000370818 ENTPD1P49961 510 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 PLK1P53350 603 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 CREB5Q02930 508 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 LSM12Q3MHD2 195 aaKnown RBP12.75□□□□□ -0.37
GPC3-201ENST00000370818 HIPK4Q8NE63 616 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 JADE3Q92613 823 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 PTERQ96BW5 349 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 DCUN1D1Q96GG9 259 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 VPS50Q96JG6 964 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 AARSD1Q9BTE6 412 aaKnown RBP12.75□□□□□ -0.37
GPC3-201ENST00000370818 ALG9Q9H6U8 611 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 POLR3BQ9NW08 1133 aaPredicted RBP12.75□□□□□ -0.37
GPC3-201ENST00000370818 FCF1Q9Y324 198 aaKnown RBP12.75□□□□□ -0.37
GPC3-201ENST00000370818 FADS3Q9Y5Q0 445 aa12.75□□□□□ -0.37
GPC3-201ENST00000370818 A0A0U1RQS6 177 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 NEMP1O14524 444 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 ADAM23O75077 832 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 CD1EP15812 388 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 EPHB1P54762 984 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 BCL2A1Q16548 175 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 LILRA6Q6PI73 481 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 RPS27LQ71UM5 84 aaKnown RBP12.74□□□□□ -0.37
GPC3-201ENST00000370818 CNDP1Q96KN2 507 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 CCT7Q99832 543 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 TNFRSF12AQ9NP84 129 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 RSL24D1Q9UHA3 163 aaKnown RBP12.74□□□□□ -0.37
GPC3-201ENST00000370818 CARNS1A5YM72 827 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 C2orf81A6NN90 581 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 K7ERQ8 282 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 THRAP10827 490 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 CD1DP15813 335 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 ZNF37AP17032 561 aaPredicted RBP12.74□□□□□ -0.37
GPC3-201ENST00000370818 CA8P35219 290 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 SERPINB5P36952 375 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 RXRGP48443 463 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 CDKN1CP49918 316 aaPredicted RBP12.74□□□□□ -0.37
GPC3-201ENST00000370818 CDH18Q13634 790 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 ATXN7L2Q5T6C5 722 aaPredicted RBP12.74□□□□□ -0.37
GPC3-201ENST00000370818 AFTPHQ6ULP2 937 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 KBTBD6Q86V97 674 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 APCDD1Q8J025 514 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 LPGAT1Q92604 370 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 CCDC126Q96EE4 140 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 PHF21BQ96EK2 531 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 COX4I2Q96KJ9 171 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 BIRC8Q96P09 236 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 ADGRE3Q9BY15 652 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 Q9H521 79 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 INTS10Q9NVR2 710 aaKnown RBP12.74□□□□□ -0.37
GPC3-201ENST00000370818 VTI1BQ9UEU0 232 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 RAB26Q9ULW5 256 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 CLEC4EQ9ULY5 219 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 POMPQ9Y244 141 aa12.74□□□□□ -0.37
GPC3-201ENST00000370818 SLCO1B7G3V0H7 640 aa12.73□□□□□ -0.37
GPC3-201ENST00000370818 FZD6O60353 706 aa12.73□□□□□ -0.37
GPC3-201ENST00000370818 CKMP06732 381 aa12.73□□□□□ -0.37
GPC3-201ENST00000370818 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
GPC3-201ENST00000370818 LPOP22079 712 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms