RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TMEM202A6NGA9 273 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 H3BM21 787 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 CCL22O00626 93 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 VEGFDO43915 354 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 UGT1A9O60656 530 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 GOT2P00505 430 aaKnown RBP15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 NME1P15531 152 aaKnown RBP15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 UGT1A6P19224 532 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 UGT1A1P22309 533 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 UGT1A4P22310 534 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 UGT1A3P35503 534 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 UGT1A5P35504 534 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 PPARDQ03181 441 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 PDIA2Q13087 525 aaKnown RBP15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 SF3A2Q15428 464 aaKnown RBP15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 ANKRD20A4Q4UJ75 823 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 ZRANB3Q5FWF4 1079 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 AARS2Q5JTZ9 985 aaKnown RBP15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 LYPLAL1Q5VWZ2 237 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 CERS6Q6ZMG9 384 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 ZNF669Q96BR6 464 aaPredicted RBP15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 GTPBP2Q9BX10 602 aaKnown RBP15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 GAREM1Q9H706 876 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 SUDS3Q9H7L9 328 aaPredicted RBP15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 UGT1A7Q9HAW7 530 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 UGT1A10Q9HAW8 530 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 UGT1A8Q9HAW9 530 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 MTRF1LQ9UGC7 380 aaKnown RBP15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 TEX264Q9Y6I9 313 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 PCDH15Q96QU1 1955 aa15.4■□□□□ 0.06
PRPF38B-202ENST00000370022 GON4LQ3T8J9 2241 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 RASGRP1O95267 797 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 CEACAM5P06731 702 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 IVLP07476 585 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 RHOXF2BP0C7M4 288 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 FOXN2P32314 431 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 PPARGP37231 505 aaPredicted RBP15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 ELK3P41970 407 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 SRP54P61011 504 aaKnown RBP15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 HNRNPKP61978 463 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 EIF2B5Q13144 721 aaKnown RBP15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 AASDHQ4L235 1098 aaPredicted RBP15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 FASTKD1Q53R41 847 aaKnown RBP15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 SPANXN3Q5MJ09 141 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 NXPE1Q8N323 547 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 LRRN4CLQ8ND94 238 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 GDAP1Q8TB36 358 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 SCARF2Q96GP6 870 aaPredicted RBP15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 PWWP2AQ96N64 755 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 RHOXF2Q9BQY4 288 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 FGF22Q9HCT0 170 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 FSCN3Q9NQT6 498 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 DNAJC28Q9NX36 388 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 ZC3H7BQ9UGR2 993 aaKnown RBP15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 TMPRSS11EQ9UL52 423 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 FAM169AQ9Y6X4 670 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 GPR179Q6PRD1 2367 aa15.39■□□□□ 0.05
PRPF38B-202ENST00000370022 A0A1B0GTQ1 180 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 ZCWPW2A0A1B0GU75 182 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 PRSS38A1L453 326 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 VAPBO95292 243 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 ASMTLO95671 621 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 TNFP01375 233 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 ZNF883P0CG24 379 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 RALBP11234 206 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 ARCN1P48444 511 aaKnown RBP15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 CCT8P50990 548 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 HK3P52790 923 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 HLTFQ14527 1009 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 LONRF1Q17RB8 773 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 ALG11Q2TAA5 492 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 TEX35Q5T0J7 233 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 GPRC6AQ5T6X5 926 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 CES3Q6UWW8 571 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 LMNTD2Q8IXW0 634 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 ZBED8Q8IZ13 594 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 MINDY1Q8N5J2 469 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 GABPB2Q8TAK5 448 aaPredicted RBP15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 IFT81Q8WYA0 676 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 TTC25Q96NG3 672 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 COPS8Q99627 209 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 EDEM2Q9BV94 578 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 SLC13A1Q9BZW2 595 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 CATSPERZQ9NTU4 200 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 DNAAF2Q9NVR5 837 aaKnown RBP15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 CHMP2BQ9UQN3 213 aa15.38■□□□□ 0.05
PRPF38B-202ENST00000370022 OTOGLQ3ZCN5 2332 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 VPS13AQ96RL7 3174 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 CFAP99D6REC4 459 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 GPR39O43194 453 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 NUAK1O60285 661 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 BANF1O75531 89 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 JUNDP17535 347 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 MSH3P20585 1137 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 ACRV1P26436 265 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 ARNTP27540 789 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 TMEM115Q12893 351 aaPredicted RBP15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 SLC14A1Q13336 389 aa15.37■□□□□ 0.05
PRPF38B-202ENST00000370022 GTF2H3Q13889 308 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms