RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ISOC1Q96CN7 298 aa6.86□□□□□ -1.31
CSDE1-204ENST00000369530 TNIP3Q96KP6 325 aa6.86□□□□□ -1.31
CSDE1-204ENST00000369530 HEMGNQ9BXL5 484 aa6.86□□□□□ -1.31
CSDE1-204ENST00000369530 CDC42EP4Q9H3Q1 356 aaKnown RBP6.86□□□□□ -1.31
CSDE1-204ENST00000369530 FBXO44Q9H4M3 255 aa6.86□□□□□ -1.31
CSDE1-204ENST00000369530 SCUBE2Q9NQ36 999 aa6.86□□□□□ -1.31
CSDE1-204ENST00000369530 PIK3R2O00459 728 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 MSI1O43347 362 aaKnown RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 PMLP29590 882 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 YWHAGP61981 247 aaKnown RBP eCLIP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SHC2P98077 582 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 CD300CQ08708 224 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 KCTD21Q4G0X4 260 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 FSCBQ5H9T9 825 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 MS4A13Q5J8X5 152 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 EGFLAMQ63HQ2 1017 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 AADACL2Q6P093 401 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 FAM47EQ6ZV65 393 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 FAM183BPQ6ZVS7 135 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 TEX26Q8N6G2 289 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SIMC1Q8NDZ2 872 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ADCY4Q8NFM4 1077 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 OR10Z1Q8NGY1 313 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SH3RF2Q8TEC5 729 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ING5Q8WYH8 240 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 NDRG1Q92597 394 aaKnown RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 VCPIP1Q96JH7 1222 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 MAGEE1Q9HCI5 957 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 CD93Q9NPY3 652 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 TLDC2A0PJX2 215 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 MAN2B1O00754 1011 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 CRTAMO95727 393 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 NTRK1P04629 796 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 DLDP09622 509 aaKnown RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 IFNA8P32881 189 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 CNR2P34972 360 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 TAS2R38P59533 333 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SRP54P61011 504 aaKnown RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 CTBSQ01459 385 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 C9orf64Q5T6V5 341 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 FAM122CQ6P4D5 195 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF783Q6ZMS7 281 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SYDE1Q6ZW31 735 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 LPCAT2Q7L5N7 544 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 GSTA5Q7RTV2 222 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 TTC30BQ8N4P2 665 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ARL14EPQ8N8R7 260 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SGCDQ92629 289 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 IRF7Q92985 503 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 TAMM41Q96BW9 452 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ECHDC3Q96DC8 303 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 TTC1Q99614 292 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 FERMT1Q9BQL6 677 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 FOXP3Q9BZS1 431 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 OSBPL2Q9H1P3 480 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ZFP14Q9HCL3 533 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 DIABLOQ9NR28 239 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 RXFP3Q9NSD7 469 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 PIGVQ9NUD9 493 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 WDR70Q9NW82 654 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 XPO7Q9UIA9 1087 aaKnown RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 PNMA8BQ9ULN7 279 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 HS3ST2Q9Y278 367 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 COMMD10Q9Y6G5 202 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SLCO1B1Q9Y6L6 691 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 A0A1W2PR77 199 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 CCDC160A6NGH7 325 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 H3BNH8 94 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 KRT75O95678 551 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 DHRS4L1P0CG22 281 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 CR2P20023 1033 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 RRM1P23921 792 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 YWHAQP27348 245 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 PEX2P28328 305 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 GCAP28676 217 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 DRD3P35462 400 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 KPNA1P52294 538 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 AP2S1P53680 142 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 MAP3K7CLP57077 242 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 IKZF1Q13422 519 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 LAPTM5Q13571 262 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 PCSK7Q16549 785 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 PMS2CLQ68D20 193 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 KIAA1211LQ6NV74 962 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 CHST9Q7L1S5 443 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 TAC4Q86UU9 113 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 CARM1Q86X55 608 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ARHGAP12Q8IWW6 846 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF512Q96ME7 567 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SNX18Q96RF0 628 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 NELL2Q99435 816 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 OR2B2Q9GZK3 357 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 VPS11Q9H270 941 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ARMC7Q9H6L4 198 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SYTL2Q9HCH5 934 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 KLHL11Q9NVR0 708 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 DCAF16Q9NXF7 216 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 SEPT3Q9UH03 358 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 ATPIF1Q9UII2 106 aa6.85□□□□□ -1.31
CSDE1-204ENST00000369530 MN1Q10571 1320 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms