RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CCDC153Q494R4 210 aa23.7■■□□□ 1.38
SNX3-203ENST00000368979 AGBL4Q5VU57 503 aa23.7■■□□□ 1.38
SNX3-203ENST00000368979 CYP2U1Q7Z449 544 aa23.7■■□□□ 1.38
SNX3-203ENST00000368979 PIM3Q86V86 326 aa23.7■■□□□ 1.38
SNX3-203ENST00000368979 NRSN1Q8IZ57 195 aa23.7■■□□□ 1.38
SNX3-203ENST00000368979 KCTD4Q8WVF5 259 aa23.7■■□□□ 1.38
SNX3-203ENST00000368979 SCAMP4Q969E2 229 aa23.7■■□□□ 1.38
SNX3-203ENST00000368979 CCDC97Q96F63 343 aaPredicted RBP23.7■■□□□ 1.38
SNX3-203ENST00000368979 ZNF317Q96PQ6 595 aaPredicted RBP23.7■■□□□ 1.38
SNX3-203ENST00000368979 GPAMQ9HCL2 828 aa23.7■■□□□ 1.38
SNX3-203ENST00000368979 KLHL2O95198 593 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 CREB5Q02930 508 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 ACOX1Q15067 660 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 HSF5Q4G112 596 aaPredicted RBP23.69■■□□□ 1.38
SNX3-203ENST00000368979 RGS9BPQ6ZS82 235 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 CACUL1Q86Y37 369 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 TRAM1L1Q8N609 369 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 DTD2Q96FN9 168 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 TSNARE1Q96NA8 513 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 GPR78Q96P69 363 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 BOCQ9BWV1 1114 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 SPATA16Q9BXB7 569 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 MKRN2Q9H000 416 aaKnown RBP23.69■■□□□ 1.38
SNX3-203ENST00000368979 ZDHHC3Q9NYG2 299 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 TMPRSS11EQ9UL52 423 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 UNC80Q8N2C7 3258 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 GMNCA6NCL1 334 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 WNT9AO14904 365 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 AP1G1O43747 822 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 DNAJC6O75061 913 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 RHOBTB1O94844 696 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 C7P10643 843 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 SLC26A3P40879 764 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 MLF2Q15773 248 aaPredicted RBP23.69■■□□□ 1.38
SNX3-203ENST00000368979 TSNAXIP1Q2TAA8 658 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 SETMARQ53H47 684 aaPredicted RBP23.69■■□□□ 1.38
SNX3-203ENST00000368979 TMEM207Q6UWW9 146 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 TBC1D1Q86TI0 1168 aaPredicted RBP23.69■■□□□ 1.38
SNX3-203ENST00000368979 KCNJ9Q92806 393 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 FAM131CQ96AQ9 280 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 CHMP6Q96FZ7 201 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 UBXN10Q96LJ8 280 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 ZSCAN5AQ9BUG6 496 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 RIOK2Q9BVS4 552 aaKnown RBP23.69■■□□□ 1.38
SNX3-203ENST00000368979 ABCG8Q9H221 673 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 PRDM6Q9NQX0 595 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 IGSF5Q9NSI5 407 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 TAS2R13Q9NYV9 303 aa23.69■■□□□ 1.38
SNX3-203ENST00000368979 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.69■■□□□ 1.38
SNX3-203ENST00000368979 MTF2Q9Y483 593 aaPredicted RBP23.69■■□□□ 1.38
SNX3-203ENST00000368979 IGLV3-16A0A075B6K0 115 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 C6P13671 934 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 TAC1P20366 129 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 TAS2R38P59533 333 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 SPNS2Q8IVW8 549 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 RPLP0P6Q8NHW5 317 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 NXNL1Q96CM4 212 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 CLPBQ9H078 707 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 NMRAL1Q9HBL8 299 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 SERGEFQ9UGK8 458 aa23.68■■□□□ 1.38
SNX3-203ENST00000368979 RUVBL2Q9Y230 463 aaKnown RBP23.68■■□□□ 1.38
SNX3-203ENST00000368979 OAS3Q9Y6K5 1087 aaKnown RBP23.68■■□□□ 1.38
SNX3-203ENST00000368979 LRRK1Q38SD2 2015 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 WDR91A4D1P6 747 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 MAN2B1O00754 1011 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 NEMP1O14524 444 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 NIPSNAP2O75323 286 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 BPGMP07738 259 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 ZNF37AP17032 561 aaPredicted RBP23.67■■□□□ 1.38
SNX3-203ENST00000368979 CD72P21854 359 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 IRX4P78413 519 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 PDAP1Q13442 181 aaKnown RBP23.67■■□□□ 1.38
SNX3-203ENST00000368979 ZNF284Q2VY69 593 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 ZNF765Q7L2R6 523 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 ADHFE1Q8IWW8 467 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 HDDC3Q8N4P3 179 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 CXorf40AQ8TE69 158 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 ANKRD49Q8WVL7 239 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 GNPTGQ9UJJ9 305 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 COQ6Q9Y2Z9 468 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 PRSS21Q9Y6M0 314 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 MYO10Q9HD67 2058 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 COL6A3P12111 3177 aa23.67■■□□□ 1.38
SNX3-203ENST00000368979 A0A1W2PP55 124 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 FADS2P1A8MWK0 482 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 TCP11X1B4DZS4 312 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 BIRC5O15392 142 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 MMP20O60882 483 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 VPS26AO75436 327 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 APOA4P06727 396 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 LTA4HP09960 611 aaKnown RBP23.66■■□□□ 1.38
SNX3-203ENST00000368979 CCDC166P0CW27 439 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 NSG1P42857 185 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 CCDC15Q0P6D6 951 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 CSHL1Q14406 222 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 EOGTQ5NDL2 527 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 LRRC8EQ6NSJ5 796 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.66■■□□□ 1.38
SNX3-203ENST00000368979 TMPRSS6Q8IU80 811 aa23.66■■□□□ 1.38
SNX3-203ENST00000368979 TMEM151AQ8N4L1 468 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms