RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ARL14Q8N4G2 192 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 TTC13Q8NBP0 860 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 CCDC112Q8NEF3 446 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 SLC35B2Q8TB61 432 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 DTX3LQ8TDB6 740 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 GLYATL1Q969I3 302 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 PRR11Q96HE9 360 aaPredicted RBP18.76■□□□□ 0.59
CKS1B-203ENST00000368439 CARD9Q9H257 536 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 TRIM39Q9HCM9 518 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 ARFGAP3Q9NP61 516 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 HACD3Q9P035 362 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 ZNHIT2Q9UHR6 403 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 C5orf60A6NFR6 353 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 D6RAR5 112 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 GAPDHSO14556 408 aaPredicted RBP18.75■□□□□ 0.59
CKS1B-203ENST00000368439 CHUKO15111 745 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 B4GAT1O43505 415 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 KRT86O43790 486 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 DXOO77932 396 aaKnown RBP18.75■□□□□ 0.59
CKS1B-203ENST00000368439 EML2O95834 649 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 ZNF8P17098 575 aaPredicted RBP18.75■□□□□ 0.59
CKS1B-203ENST00000368439 LSSP48449 732 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 CCZ1BP86790 482 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 CCZ1P86791 482 aaPredicted RBP18.75■□□□□ 0.59
CKS1B-203ENST00000368439 KHDC1Q4VXA5 237 aaKnown RBP18.75■□□□□ 0.59
CKS1B-203ENST00000368439 B3GNT8Q7Z7M8 397 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 Q8N9G6 341 aaPredicted RBP18.75■□□□□ 0.59
CKS1B-203ENST00000368439 BLOC1S5Q8TDH9 187 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 VPS35Q96QK1 796 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 GFM1Q96RP9 751 aaKnown RBP18.75■□□□□ 0.59
CKS1B-203ENST00000368439 FERMT1Q9BQL6 677 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 FICDQ9BVA6 458 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 FSD1LQ9BXM9 530 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 OR2AG1Q9H205 316 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 POLR1BQ9H9Y6 1135 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 IL26Q9NPH9 171 aa18.75■□□□□ 0.59
CKS1B-203ENST00000368439 ITPR1Q14643 2758 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 A0A087WV48 116 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 PMS2P1A4D2B8 440 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 A6NCN8 305 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 GOLGA6L9A6NEM1 432 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 PPM1DO15297 605 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 SLC25A14O95258 325 aaPredicted RBP18.74■□□□□ 0.59
CKS1B-203ENST00000368439 CA5AP35218 305 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 GDF10P55107 478 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 GABREP78334 506 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 PEX6Q13608 980 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 TBC1D25Q3MII6 688 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 ATP13A5Q4VNC0 1218 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 MEI1Q5TIA1 1274 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 DENND5AQ6IQ26 1287 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 IGF2-ASQ6U949 168 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 CHST15Q7LFX5 561 aaPredicted RBP18.74■□□□□ 0.59
CKS1B-203ENST00000368439 TMPRSS9Q7Z410 1059 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 GLT6D1Q7Z4J2 308 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 SNIP1Q8TAD8 396 aaKnown RBP18.74■□□□□ 0.59
CKS1B-203ENST00000368439 UBE2Q2Q8WVN8 375 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 SYNDIG1Q9H7V2 258 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 ASCL3Q9NQ33 180 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 SATB2Q9UPW6 733 aa18.74■□□□□ 0.59
CKS1B-203ENST00000368439 AAR2Q9Y312 384 aaKnown RBP18.74■□□□□ 0.59
CKS1B-203ENST00000368439 GPR89AB7ZAQ6 455 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 GRID2O43424 1007 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 BUD23O43709 281 aaKnown RBP18.73■□□□□ 0.59
CKS1B-203ENST00000368439 ZNF189O75820 626 aaPredicted RBP18.73■□□□□ 0.59
CKS1B-203ENST00000368439 STK10O94804 968 aaKnown RBP18.73■□□□□ 0.59
CKS1B-203ENST00000368439 GPR89BP0CG08 455 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 ACP5P13686 325 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 EIF2S3P41091 472 aaKnown RBP18.73■□□□□ 0.59
CKS1B-203ENST00000368439 PTPRCAPQ14761 206 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 KCTD11Q693B1 232 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 PHYKPLQ8IUZ5 450 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 FAM71DQ8N9W8 422 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 LIN37Q96GY3 246 aaPredicted RBP18.73■□□□□ 0.59
CKS1B-203ENST00000368439 APOL2Q9BQE5 337 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 TBC1D29Q9UFV1 150 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 ATXN7L1Q9ULK2 861 aaPredicted RBP18.73■□□□□ 0.59
CKS1B-203ENST00000368439 KCNK6Q9Y257 313 aa18.73■□□□□ 0.59
CKS1B-203ENST00000368439 PRR19A6NJB7 356 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 MTX2O75431 263 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 METTL18O95568 372 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 CCKBRP32239 447 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 SPAM1P38567 509 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 TNNT3P45378 269 aaPredicted RBP18.72■□□□□ 0.59
CKS1B-203ENST00000368439 CLCNKAP51800 687 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 OR1D5P58170 312 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 ZFP36L1Q07352 338 aaKnown RBP18.72■□□□□ 0.59
CKS1B-203ENST00000368439 PRPSAP1Q14558 356 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 C3orf38Q5JPI3 329 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 ZDHHC20Q5W0Z9 365 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 ZNF547Q8IVP9 402 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 SLITRK4Q8IW52 837 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 LSMEM2Q8N112 164 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 SFRP1Q8N474 314 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 TMEM121Q9BTD3 319 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 ARNT2Q9HBZ2 717 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 SLC23A2Q9UGH3 650 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 PCDHGA8Q9Y5G5 932 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 ARL5AQ9Y689 179 aa18.72■□□□□ 0.59
CKS1B-203ENST00000368439 RHPN2P1A8MT19 583 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms