RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 NAALADL1Q9UQQ1 740 aa5.13□□□□□ -1.59
ECHDC1-204ENST00000368292 TNFSF13BQ9Y275 285 aa5.13□□□□□ -1.59
ECHDC1-204ENST00000368292 PLEKHM1Q9Y4G2 1056 aa5.13□□□□□ -1.59
ECHDC1-204ENST00000368292 HELZ2Q9BYK8 2649 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 IQANK1A0A1B0GTG1 560 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 XKRY2A2RUG3 117 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 MBD3L4A6NDZ8 208 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 MBD3L3A6NE82 208 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 E7EVH7 732 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 PTGES3LE9PB15 166 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 NDUFAB1O14561 156 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 TRDMT1O14717 391 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CASC3O15234 703 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 MBTPS2O43462 519 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 ZNF189O75820 626 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 RECQL4O94761 1208 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 GCNT3O95395 438 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 ECDO95905 644 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 GNAI2P04899 355 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 GRPP07492 148 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 ABCB1P08183 1280 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 HNRNPA1P09651 372 aaKnown RBP eCLIP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 PRKAR1AP10644 381 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 GHRP10912 638 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 PIM1P11309 404 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 KRT5P13647 590 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 FDXRP22570 491 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 MGAT1P26572 445 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 HOXA7P31268 230 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CCR1P32246 355 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CIITAP33076 1130 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 BMI1P35226 326 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 IGHMBP2P38935 993 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CCT6AP40227 531 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 EIF2DP41214 584 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 GYG1P46976 350 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 RABIFP47224 123 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CAMLGP49069 296 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 TRA2BP62995 288 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 GSTO1P78417 241 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 SLC12A1Q13621 1099 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 STK38Q15208 465 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 Q3ZCU0 254 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 KCTD21Q4G0X4 260 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 ZNF805Q5CZA5 627 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CAVIN1Q6NZI2 390 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CATSPERGQ6ZRH7 1159 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 PPP1R32Q7Z5V6 425 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CPLX4Q7Z7G2 160 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 GPR149Q86SP6 731 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 ADGRG6Q86SQ4 1221 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 MCEMP1Q8IX19 187 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 C17orf53Q8N3J3 647 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 ZNF276Q8N554 614 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 ZNF321PQ8N8H1 164 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 MRPL43Q8N983 215 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 TBC1D15Q8TC07 691 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 DNAAF4Q8WXU2 420 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 PIBF1Q8WXW3 757 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 KAT2BQ92831 832 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 FAM162AQ96A26 154 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 RAB7BQ96AH8 199 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 PABPC5Q96DU9 382 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 SPACA9Q96E40 222 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 SIPA1Q96FS4 1042 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 C7orf34Q96L11 122 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 IFT74Q96LB3 600 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 FAM111AQ96PZ2 611 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 DCLRE1CQ96SD1 692 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 RUFY1Q96T51 708 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 FAM118BQ9BPY3 351 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 GPR63Q9BZJ6 419 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 SCAND2PQ9GZW5 306 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 ABCG8Q9H221 673 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 BICC1Q9H694 974 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 DCTPP1Q9H773 170 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 WDR6Q9NNW5 1121 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 A1CFQ9NQ94 594 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 RRAGDQ9NQL2 400 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 SNX15Q9NRS6 342 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 SPATS2LQ9NUQ6 558 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 TAB2Q9NYJ8 693 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 MBD2Q9UBB5 411 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 SLC39A10Q9ULF5 831 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 MAN2B2Q9Y2E5 1009 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 DLGAP4Q9Y2H0 992 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CCL27Q9Y4X3 112 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 CLDN16Q9Y5I7 305 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 FAM169AQ9Y6X4 670 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 COMMD3-BMI1R4GMX3 469 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 FANCMQ8IYD8 2048 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 ROBO3Q96MS0 1386 aa5.12□□□□□ -1.59
ECHDC1-204ENST00000368292 SIPA1L1O43166 1804 aa5.11□□□□□ -1.59
ECHDC1-204ENST00000368292 ZNFX1Q9P2E3 1918 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-204ENST00000368292 A0A1W2PRV1 198 aa5.11□□□□□ -1.59
ECHDC1-204ENST00000368292 CCDC78A2IDD5 438 aa5.11□□□□□ -1.59
ECHDC1-204ENST00000368292 DDTLA6NHG4 134 aaPredicted RBP5.11□□□□□ -1.59
ECHDC1-204ENST00000368292 SLC9B1P1A6NJY1 282 aa5.11□□□□□ -1.59
ECHDC1-204ENST00000368292 CLCA1A8K7I4 914 aa5.11□□□□□ -1.59
ECHDC1-204ENST00000368292 HSBP1L1C9JCN9 74 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms