RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CARD16Q5EG05 197 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 BHLHB9Q6PI77 547 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 MACC1Q6ZN28 852 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 HIST3H2AQ7L7L0 130 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 TAS1R3Q7RTX0 852 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 STK32CQ86UX6 486 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 KCT2Q8NC54 265 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 HIST1H2ACQ93077 130 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 CNBD2Q96M20 576 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 AARSD1Q9BTE6 412 aaKnown RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 ACSS2Q9NR19 701 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 TDP1Q9NUW8 608 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 CYP8B1Q9UNU6 501 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 PSMA3P25788 255 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 PSME3P61289 254 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 OC90Q02509 493 aaPredicted RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 TMEM164Q5U3C3 297 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 MFSD5Q6N075 450 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 NAPRTQ6XQN6 538 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 PNPLA8Q9NP80 782 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 CRTAC1Q9NQ79 661 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 DLGAP2Q9P1A6 1054 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 NFKBIL1Q9UBC1 381 aaPredicted RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 NPEPPSL1A6NEC2 478 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 RECQL5O94762 991 aaPredicted RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 IPO13O94829 963 aaKnown RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 COX4I1P13073 169 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 PPIDQ08752 370 aaKnown RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 SERPINA9Q86WD7 417 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 DPP10Q8N608 796 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 CELF5Q8N6W0 485 aaKnown RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 LMX1AQ8TE12 382 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 SMPDL3BQ92485 455 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 ANGPT4Q9Y264 503 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 ZNF711Q9Y462 761 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 TRAF6Q9Y4K3 522 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 COLEC10Q9Y6Z7 277 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 COL2A1P02458 1487 aaPredicted RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 MATN4O95460 622 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 OGNP20774 298 aaKnown RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 UBXN11Q5T124 520 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 MBLAC2Q68D91 279 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 TMEM220Q6QAJ8 160 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 FBXO15Q8NCQ5 510 aaPredicted RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 ADI1Q9BV57 179 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 SMOC2Q9H3U7 446 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 IL23AQ9NPF7 189 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 ENOPH1Q9UHY7 261 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 LYVE1Q9Y5Y7 322 aa11.52□□□□□ -0.57
SYNE1-204ENST00000367248 CFAP20Q9Y6A4 193 aaKnown RBP11.52□□□□□ -0.57
SYNE1-204ENST00000367248 GOLGA4Q13439 2230 aaKnown RBP11.51□□□□□ -0.57
SYNE1-204ENST00000367248 CYBAP13498 195 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 ACP5P13686 325 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 VAV1P15498 845 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 PIK3R1P27986 724 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 MPP1Q00013 466 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 MCEMP1Q8IX19 187 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 KLHL4Q9C0H6 718 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 OR2AG1Q9H205 316 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 KLHL20Q9Y2M5 609 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 ZNF780BQ9Y6R6 833 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 IGKV6-21A0A0C4DH24 114 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 OLFML1Q6UWY5 402 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 ZNF280BQ86YH2 543 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 LRRC15Q8TF66 581 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 IRF7Q92985 503 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 SGIP1Q9BQI5 828 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 BTBD1Q9H0C5 482 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 MAGEA13PA6NCF6 341 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 DYNC1I2Q13409 638 aaKnown RBP11.51□□□□□ -0.57
SYNE1-204ENST00000367248 FAM43BQ6ZT52 329 aaPredicted RBP11.51□□□□□ -0.57
SYNE1-204ENST00000367248 CAMK1DQ8IU85 385 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 RP9Q8TA86 221 aaKnown RBP11.51□□□□□ -0.57
SYNE1-204ENST00000367248 DPYSL5Q9BPU6 564 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 KLHL25Q9H0H3 589 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 PDP2Q9P2J9 529 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 ZNF180Q9UJW8 692 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 CORO1CQ9ULV4 474 aaPredicted RBP11.51□□□□□ -0.57
SYNE1-204ENST00000367248 MTF2Q9Y483 593 aaPredicted RBP11.51□□□□□ -0.57
SYNE1-204ENST00000367248 RFPL2O75678 378 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 HSMCR30P0CW71 290 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 PTGER3P43115 390 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 PTGIRP43119 386 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 CHRNA4P43681 627 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 TIGD2Q4W5G0 525 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 CYP4Z2PQ8N1L4 340 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 NXNL1Q96CM4 212 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 C12orf66Q96MD2 445 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 SRMSQ9H3Y6 488 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 INTS7Q9NVH2 962 aaKnown RBP11.51□□□□□ -0.57
SYNE1-204ENST00000367248 ERVK-11Q9UQG0 969 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 PLLPQ9Y342 182 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 AK5Q9Y6K8 562 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 GABRDO14764 452 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 CCNDBP1O95273 360 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 SLC25A3Q00325 362 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 FASTKD3Q14CZ7 662 aaKnown RBP11.51□□□□□ -0.57
SYNE1-204ENST00000367248 TYW3Q6IPR3 259 aaKnown RBP11.51□□□□□ -0.57
SYNE1-204ENST00000367248 ZFP1Q6P2D0 407 aa11.51□□□□□ -0.57
SYNE1-204ENST00000367248 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms