RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MTG2Q9H4K7 406 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 SGK2Q9HBY8 427 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 ANKMY1Q9P2S6 941 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 TBK1Q9UHD2 729 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 OR51B4Q9Y5P0 310 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 IKBKGQ9Y6K9 419 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 FAM169AQ9Y6X4 670 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 IQANK1A0A1B0GTG1 560 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 LOC285095A0A1B0GVY8 99 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 A0A1W2PPC4 97 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 TIMM44O43615 452 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 PMPCBO75439 489 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 ZMPSTE24O75844 475 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 EPOP01588 193 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 DNTTP04053 509 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 CYBBP04839 570 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 CNTFP26441 200 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 CD86P42081 329 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 LSSP48449 732 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 SERPINB9P50453 376 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 PLK1P53350 603 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC18A1P54219 525 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 MAXP61244 160 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 RPS14P62263 151 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 CRADDP78560 199 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 DSC2Q02487 901 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 ZBTB16Q05516 673 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 ITKQ08881 620 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 MGAT5Q09328 741 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 BNIP3Q12983 259 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 CDH18Q13634 790 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 TTC31Q49AM3 519 aaPredicted RBP11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 ANKRD20A4Q4UJ75 823 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 CERCAMQ5T4B2 595 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 LGSNQ5TDP6 509 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 TRMT10BQ6PF06 316 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 ATG14Q6ZNE5 492 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 MARK2Q7KZI7 788 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 PPM1NQ8N819 430 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 DCAF4L2Q8NA75 395 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 FIBINQ8TAL6 211 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 MZB1Q8WU39 189 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 CYB5D2Q8WUJ1 264 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 CDKL2Q92772 493 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 RANBP9Q96S59 729 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 SEMA3CQ99985 751 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 APOL2Q9BQE5 337 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 FEM1AQ9BSK4 669 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 CINPQ9BW66 212 aaPredicted RBP11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 FSD1LQ9BXM9 530 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 TMEM245Q9H330 911 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 SSU72Q9NP77 194 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 SMYD2Q9NRG4 433 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 PIH1D1Q9NWS0 290 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 SERGEFQ9UGK8 458 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 RPS6KL1Q9Y6S9 549 aa11.23□□□□□ -0.61
CSNK1E-202ENST00000366216 ZCWPW2A0A1B0GU75 182 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 A0A1W2PR77 199 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 CXorf49A8MYA2 514 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 MUSKO15146 869 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 PRPF4O43172 522 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 ATP9BO43861 1147 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 GP1BBP13224 206 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 BRAFP15056 766 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 KRT15P19012 456 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 CR2P20023 1033 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 ADRA1DP25100 572 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 MZF1P28698 734 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 CD38P28907 300 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 GNGT1P63211 74 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 ARF5P84085 180 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC12A1Q13621 1099 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 CYTH1Q15438 398 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 FNDC3BQ53EP0 1204 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 FSCBQ5H9T9 825 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 RALGPS1Q5JS13 557 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 MFN1Q8IWA4 741 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 CTAGE3PQ8IX95 158 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 SRRM1Q8IYB3 904 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 ZNF557Q8N988 423 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 DDI1Q8WTU0 396 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 ZNF669Q96BR6 464 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 ALKBH8Q96BT7 664 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 MTBPQ96DY7 904 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 CERS2Q96G23 380 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 FEM1CQ96JP0 617 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 SELENOSQ9BQE4 189 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 TRIM56Q9BRZ2 755 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 POLR1BQ9H9Y6 1135 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 FBRSQ9HAH7 460 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 ASCL3Q9NQ33 180 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 PRSS16Q9NQE7 514 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 AASDHPPTQ9NRN7 309 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 THSD1Q9NS62 852 aa11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-202ENST00000366216 DOPEY1Q5JWR5 2465 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 ZFC3H1O60293 1989 aaKnown RBP11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 FAM47DPA6NHR8 397 aa11.21□□□□□ -0.61
CSNK1E-202ENST00000366216 KRT38O76015 456 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms