RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 ACOX1Q15067 660 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 PTPRRQ15256 657 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 SMAD1Q15797 465 aaKnown RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 CDKN3Q16667 212 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 COL28A1Q2UY09 1125 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 KRT71Q3SY84 523 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 KBTBD12Q3ZCT8 623 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 TMEM52BQ4KMG9 183 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 FASTKD1Q53R41 847 aaKnown RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 HSP90AA5PQ58FG0 334 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 CEP85LQ5SZL2 805 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 UBAP2Q5T6F2 1119 aaKnown RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 RNF187Q5TA31 235 aaPredicted RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 KIAA1161Q6NSJ0 714 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 NEPROQ6NW34 567 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 FAM151BQ6UXP7 276 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 LIPIQ6XZB0 460 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 KIAA0408Q6ZU52 694 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 MARK2Q7KZI7 788 aaKnown RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 LPCAT2Q7L5N7 544 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 PTAR1Q7Z6K3 402 aaPredicted RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 SDCCAG8Q86SQ7 713 aaPredicted RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 PIP4P1Q86T03 277 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 SLC26A11Q86WA9 606 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 LRRC6Q86X45 466 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 LMNTD2Q8IXW0 634 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 NRSN1Q8IZ57 195 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 CBARPQ8N350 705 aaPredicted RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 RIBC1Q8N443 379 aaPredicted RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 PPM1NQ8N819 430 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 OR14C36Q8NHC7 312 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 MDM1Q8TC05 714 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 SCG3Q8WXD2 468 aaKnown RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 HDAC10Q969S8 669 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 FAM131CQ96AQ9 280 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 NUS1Q96E22 293 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 DTD2Q96FN9 168 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 CDKN2AIPNLQ96HQ2 116 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 SGSM3Q96HU1 749 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 SPACA7Q96KW9 195 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 ZIM3Q96PE6 472 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 PAFAH2Q99487 392 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 TTC1Q99614 292 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 CPNE1Q99829 537 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 ZSCAN5AQ9BUG6 496 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 C1QTNF7Q9BXJ2 289 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 BTBD1Q9H0C5 482 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 STMN4Q9H169 189 aaPredicted RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 KDM4CQ9H3R0 1056 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 SGK2Q9HBY8 427 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 BPIFA1Q9NP55 256 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 IARS2Q9NSE4 1012 aaKnown RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 CATSPERZQ9NTU4 200 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 KCTD5Q9NXV2 234 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 IL1RAPL1Q9NZN1 696 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 IL17CQ9P0M4 197 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 VPS18Q9P253 973 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 USP36Q9P275 1121 aaKnown RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 PSMC3IPQ9P2W1 217 aaPredicted RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 NFKBIL1Q9UBC1 381 aaPredicted RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 SLC24A2Q9UI40 661 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 FKBPLQ9UIM3 349 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 GGT7Q9UJ14 662 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 RABGEF1Q9UJ41 708 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 PILRBQ9UKJ0 227 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 CYP8B1Q9UNU6 501 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 VPS9D1Q9Y2B5 631 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 FNDC3AQ9Y2H6 1198 aaKnown RBP6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 SLC30A1Q9Y6M5 507 aa6.74□□□□□ -1.33
RNU1-55P-201ENST00000365510 TNRC6BQ9UPQ9 1833 aaKnown RBP6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 ANKRD11Q6UB99 2663 aaPredicted RBP6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 A0A0U1RQS6 177 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 IQANK1A0A1B0GTG1 560 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 OR51F1A6NGY5 319 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 LRRC72A6NJI9 287 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 CYSRT1A8MQ03 144 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 GOLGA8KD6RF30 607 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 POC1B-GALNT4F8VUJ3 575 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 GOLGA8TH3BQL2 631 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 MAP2K7O14733 419 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 RASGRF2O14827 1237 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 MMP20O60882 483 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 CDH16O75309 829 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 TCEA3O75764 348 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 TM7SF2O76062 418 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 SRP72O76094 671 aaKnown RBP6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 RECQL5O94762 991 aaPredicted RBP6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 IGLV3-19P01714 112 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 PRB1P04280 392 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 PYGLP06737 847 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 MYZAPP0CAP1 466 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 ATP5DP30049 168 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 FOXN2P32314 431 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 PPARGP37231 505 aaPredicted RBP6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 GP5P40197 560 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 ETV3P41162 512 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 SLC1A2P43004 574 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 MSH2P43246 934 aa6.73□□□□□ -1.33
RNU1-55P-201ENST00000365510 SLCO1A2P46721 670 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms