RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 RPS21P63220 83 aaKnown RBP20.5■□□□□ 0.87
SHISA4-201ENST00000362011 NFATC2Q13469 925 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 LYPLAL1Q5VWZ2 237 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 LAIR1Q6GTX8 287 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 CAMKK1Q8N5S9 505 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 TRAM1L1Q8N609 369 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 ULK4Q96C45 1275 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 AP2M1Q96CW1 435 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 TTC1Q99614 292 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 RIOK2Q9BVS4 552 aaKnown RBP20.5■□□□□ 0.87
SHISA4-201ENST00000362011 INTS10Q9NVR2 710 aaKnown RBP20.5■□□□□ 0.87
SHISA4-201ENST00000362011 CRLS1Q9UJA2 301 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 GMEB2Q9UKD1 530 aa20.5■□□□□ 0.87
SHISA4-201ENST00000362011 CDV3Q9UKY7 258 aaKnown RBP20.5■□□□□ 0.87
SHISA4-201ENST00000362011 ZFR2Q9UPR6 939 aaKnown RBP20.5■□□□□ 0.87
SHISA4-201ENST00000362011 EPG5Q9HCE0 2579 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3DA0A087WVF3 549 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3IA0A087WXS9 549 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3EA0A087X179 549 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3KA0A087X1G2 549 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TRBV5-4A0A0C4DH59 114 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3FA6NER0 549 aaPredicted RBP20.49■□□□□ 0.87
SHISA4-201ENST00000362011 LRRC72A6NJI9 287 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3LB9A6J9 549 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 LRP3O75074 770 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 KRT37O76014 449 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 KRT38O76015 456 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 AHSGP02765 367 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3HP0C7X1 549 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 ATP5DP30049 168 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 CXCL12P48061 93 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 LEPRP48357 1165 aaKnown RBP20.49■□□□□ 0.87
SHISA4-201ENST00000362011 CD151P48509 253 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 CDKN1CP49918 316 aaPredicted RBP20.49■□□□□ 0.87
SHISA4-201ENST00000362011 ILF2Q12905 390 aaKnown RBP20.49■□□□□ 0.87
SHISA4-201ENST00000362011 RNF187Q5TA31 235 aaPredicted RBP20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3GQ6DHY5 549 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3CQ6IPX1 549 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 CERS6Q6ZMG9 384 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 LDB1Q86U70 411 aaPredicted RBP20.49■□□□□ 0.87
SHISA4-201ENST00000362011 PIANPQ8IYJ0 282 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 TBC1D3Q8IZP1 549 aaPredicted RBP20.49■□□□□ 0.87
SHISA4-201ENST00000362011 OR2T34Q8NGX1 318 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 SCAMP4Q969E2 229 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 PGM2Q96G03 612 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 ZSCAN5AQ9BUG6 496 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 STMN4Q9H169 189 aaPredicted RBP20.49■□□□□ 0.87
SHISA4-201ENST00000362011 RHOJQ9H4E5 214 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 VPS9D1Q9Y2B5 631 aa20.49■□□□□ 0.87
SHISA4-201ENST00000362011 A0A1W2PQU0 124 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 FAM47DPA6NHR8 397 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 AGAP14A8MT82 685 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 ZNF217O75362 1048 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 NDUFS3O75489 264 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 S1PR4O95977 384 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 F7P08709 466 aaPredicted RBP20.48■□□□□ 0.87
SHISA4-201ENST00000362011 SNRPAP09012 282 aaKnown RBP20.48■□□□□ 0.87
SHISA4-201ENST00000362011 UGT1A6P19224 532 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 UGT1A1P22309 533 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 UGT1A4P22310 534 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 OXTRP30559 389 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 ACSL1P33121 698 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 UGT1A3P35503 534 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 UGT1A5P35504 534 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 LIMK2P53671 638 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 DPTQ07507 201 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 AGERQ15109 404 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 ATP13A5Q4VNC0 1218 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 SETMARQ53H47 684 aaPredicted RBP20.48■□□□□ 0.87
SHISA4-201ENST00000362011 AGBL2Q5U5Z8 902 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 SEL1L3Q68CR1 1132 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 NLRP8Q86W28 1048 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 ZC3HC1Q86WB0 502 aaKnown RBP20.48■□□□□ 0.87
SHISA4-201ENST00000362011 SERPINA9Q86WD7 417 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 HORMAD1Q86X24 394 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 TPSD1Q9BZJ3 242 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 CYP8B1Q9UNU6 501 aa20.48■□□□□ 0.87
SHISA4-201ENST00000362011 TP53BP1Q12888 1972 aaPredicted RBP20.47■□□□□ 0.87
SHISA4-201ENST00000362011 GPR39O43194 453 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 HAUS5O94927 633 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 SYF2O95926 243 aaKnown RBP20.47■□□□□ 0.87
SHISA4-201ENST00000362011 RETP07949 1114 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 ACRV1P26436 265 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 GABRB3P28472 473 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 SGCGQ13326 291 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 MAP7D1Q3KQU3 841 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 TMEM259Q4ZIN3 620 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 HSP90B2PQ58FF3 399 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 CNSTQ6PJW8 725 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 CYP4X1Q8N118 509 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 NXPE1Q8N323 547 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 MTBPQ96DY7 904 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 ATXN7L3BQ96GX2 97 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 VPS39Q96JC1 886 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 MCMBPQ9BTE3 642 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 C1QTNF7Q9BXJ2 289 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 MED4Q9NPJ6 270 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 SMOXQ9NWM0 555 aa20.47■□□□□ 0.87
SHISA4-201ENST00000362011 CORO1CQ9ULV4 474 aaPredicted RBP20.47■□□□□ 0.87
SHISA4-201ENST00000362011 CACNA1BQ00975 2339 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms