RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 KIR2DS5Q14953 304 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 CCDC122Q5T0U0 273 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 TIGD7Q6NT04 549 aaPredicted RBP20.87■□□□□ 0.93
CD47-202ENST00000361309 CLEC18BQ6UXF7 455 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 ESX1Q8N693 406 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 NIPA2Q8N8Q9 360 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 CLEC18CQ8NCF0 446 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 ARRDC2Q8TBH0 407 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 LYSMD1Q96S90 227 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 EPB41L1Q9H4G0 881 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 FAM83DQ9H4H8 585 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 PRDM8Q9NQV8 689 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 SIDT1Q9NXL6 827 aaKnown RBP20.87■□□□□ 0.93
CD47-202ENST00000361309 RCOR3Q9P2K3 495 aaPredicted RBP20.87■□□□□ 0.93
CD47-202ENST00000361309 RPS6KL1Q9Y6S9 549 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 MN1Q10571 1320 aaPredicted RBP20.86■□□□□ 0.93
CD47-202ENST00000361309 SPTBN1Q01082 2364 aaKnown RBP20.86■□□□□ 0.93
CD47-202ENST00000361309 PRR19A6NJB7 356 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 OR5K4A6NMS3 321 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 GRID2O43424 1007 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 GP1BBP13224 206 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 CA4P22748 312 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 GFERP55789 205 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 FOXM1Q08050 763 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 NIPAL4Q0D2K0 466 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 MAP7Q14244 749 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 CRTC2Q53ET0 693 aaPredicted RBP20.86■□□□□ 0.93
CD47-202ENST00000361309 NCBP2-AS2Q69YL0 99 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 PLXDC1Q8IUK5 500 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 LRRN4Q8WUT4 740 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 ULBP3Q9BZM4 244 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 PKD2L2Q9NZM6 624 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 IP6K2Q9UHH9 426 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 ANAPC7Q9UJX3 599 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 PLAAQ9Y263 795 aa20.86■□□□□ 0.93
CD47-202ENST00000361309 RP1L1Q8IWN7 2480 aaPredicted RBP20.85■□□□□ 0.93
CD47-202ENST00000361309 LILRA5A6NI73 299 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 NUAK1O60285 661 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 HLA-DQB2P05538 268 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 ANKRD34CP0C6C1 535 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 ZNF28P17035 718 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 SSR1P43307 286 aaKnown RBP20.85■□□□□ 0.93
CD47-202ENST00000361309 RPL26P61254 145 aaKnown RBP20.85■□□□□ 0.93
CD47-202ENST00000361309 PAFAH1B3Q15102 231 aaKnown RBP20.85■□□□□ 0.93
CD47-202ENST00000361309 PHYKPLQ8IUZ5 450 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 FAM71BQ8TC56 605 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 PLEKHG4BQ96PX9 1271 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 THAP2Q9H0W7 228 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 CARD9Q9H257 536 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 ARFGAP3Q9NP61 516 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 OGFRQ9NZT2 677 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 ATXN10Q9UBB4 475 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 AMACRQ9UHK6 382 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 RPL26L1Q9UNX3 145 aaKnown RBP20.85■□□□□ 0.93
CD47-202ENST00000361309 TP53TG5Q9Y2B4 290 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 KCTD3Q9Y597 815 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 KCNMB2Q9Y691 235 aa20.85■□□□□ 0.93
CD47-202ENST00000361309 TNRC6AQ8NDV7 1962 aaKnown RBP20.85■□□□□ 0.93
CD47-202ENST00000361309 NTRK1P04629 796 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 ZNF8P17098 575 aaPredicted RBP20.84■□□□□ 0.93
CD47-202ENST00000361309 TYRP1P17643 537 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 NR1D1P20393 614 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 CCNCP24863 283 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 DLSTP36957 453 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 ARSEP51690 589 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 UBE2IP63279 158 aaKnown RBP20.84■□□□□ 0.93
CD47-202ENST00000361309 KLRB1Q12918 225 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 DPYSL3Q14195 570 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 IFI16Q16666 785 aaKnown RBP20.84■□□□□ 0.93
CD47-202ENST00000361309 QPCTQ16769 361 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 FILIP1LQ4L180 1135 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 ANKRD20A8PQ5CZ79 823 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 ZNF648Q5T619 568 aaPredicted RBP20.84■□□□□ 0.93
CD47-202ENST00000361309 AVL9Q8NBF6 648 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 CCHCR1Q8TD31 782 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 C9orf72Q96LT7 481 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 TSGA13Q96PP4 275 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 NUP85Q9BW27 656 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 OR2AG1Q9H205 316 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 OSGEPL1Q9H4B0 414 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 KLC4Q9NSK0 619 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 HAUS2Q9NVX0 235 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 SCHIP1Q9P0W5 487 aaPredicted RBP20.84■□□□□ 0.93
CD47-202ENST00000361309 MAN2B2Q9Y2E5 1009 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 PCDHB3Q9Y5E6 796 aa20.84■□□□□ 0.93
CD47-202ENST00000361309 ICE1Q9Y2F5 2266 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 C9P02748 559 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 SEPHS1P49903 392 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 CLCNKAP51800 687 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 TYRO3Q06418 890 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 ATP13A4Q4VNC1 1196 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 C6orf15Q6UXA7 325 aaPredicted RBP20.83■□□□□ 0.93
CD47-202ENST00000361309 FAM26EQ8N5C1 309 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 GALNT6Q8NCL4 622 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 FATE1Q969F0 183 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 MIB2Q96AX9 1013 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 TGM7Q96PF1 710 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 MLPHQ9BV36 600 aaPredicted RBP20.83■□□□□ 0.93
CD47-202ENST00000361309 CROTQ9UKG9 612 aa20.83■□□□□ 0.93
CD47-202ENST00000361309 ADGRG1Q9Y653 693 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms