RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 KCTD4Q8WVF5 259 aa13.8□□□□□ -0.2
CSNK1E-201ENST00000359867 PYDC1Q8WXC3 89 aa13.8□□□□□ -0.2
CSNK1E-201ENST00000359867 ALG14Q96F25 216 aa13.8□□□□□ -0.2
CSNK1E-201ENST00000359867 SORT1Q99523 831 aa13.8□□□□□ -0.2
CSNK1E-201ENST00000359867 CCDC106Q9BWC9 280 aa13.8□□□□□ -0.2
CSNK1E-201ENST00000359867 NDE1Q9NXR1 346 aa13.8□□□□□ -0.2
CSNK1E-201ENST00000359867 SUN2Q9UH99 717 aa13.8□□□□□ -0.2
CSNK1E-201ENST00000359867 TARM1B6A8C7 271 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 MAGEC1O60732 1142 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 TMCC1O94876 653 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 OGNP20774 298 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 SLC6A11P48066 632 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 SOX9P48436 509 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 EPHB1P54762 984 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 ASPHQ12797 758 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 TAF1AQ15573 450 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 CNPY1Q3B7I2 92 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 LRRC8EQ6NSJ5 796 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 DCAF4L2Q8NA75 395 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 SCYL1Q96KG9 808 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 TBATAQ96M53 351 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 GPR78Q96P69 363 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 ADGRE3Q9BY15 652 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 BRD9Q9H8M2 597 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 KCNK12Q9HB15 430 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 NLE1Q9NVX2 485 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 KIAA1522Q9P206 1035 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 TMCO1Q9UM00 188 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 KCTD3Q9Y597 815 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 ARL5AQ9Y689 179 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 PDE5AO76074 875 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 PRLP01236 227 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 LYNP07948 512 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 ALOX15P16050 662 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 SLC26A3P40879 764 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 CBX3Q13185 183 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 GEN1Q17RS7 908 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 PLEKHG6Q3KR16 790 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 FUT11Q495W5 492 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 C6orf163Q5TEZ5 329 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 LIPMQ5VYY2 423 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 NCEH1Q6PIU2 408 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 NET1Q7Z628 596 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 FSTL5Q8N475 847 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 CCDC124Q96CT7 223 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 RMDN1Q96DB5 314 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 DNAJC1Q96KC8 554 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 NSMCE3Q96MG7 304 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 GBP5Q96PP8 586 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 VPS51Q9UID3 782 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 VWA7Q9Y334 891 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 TICRRQ7Z2Z1 1910 aa13.79□□□□□ -0.2
CSNK1E-201ENST00000359867 ARNTLO00327 626 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 AURKAO14965 403 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 CD3EAPO15446 510 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 HOXC11O43248 304 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 TULP3O75386 442 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 MT-CO1P00395 513 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 GOT2P00505 430 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 SBK3P0C264 359 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 CTSOP43234 321 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 ZNF789Q5FWF6 425 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 HECTD2Q5U5R9 776 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 NXNL1Q96CM4 212 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 CHFRQ96EP1 664 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 LMLNQ96KR4 655 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 RPL10LQ96L21 214 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 ECSITQ9BQ95 431 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 MRPL57Q9BQC6 102 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 MRPL46Q9H2W6 279 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 DNAJC28Q9NX36 388 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 SPATA7Q9P0W8 599 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 LHX3Q9UBR4 397 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 SORCS3Q9UPU3 1222 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 RAI2Q9Y5P3 530 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 C2orf81A6NN90 581 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 PABPC1P11940 636 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 GJA4P35212 333 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 DGKGP49619 791 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 HK2P52789 917 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 FAM83EQ2M2I3 478 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 PITRM1Q5JRX3 1037 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 RBM20Q5T481 1227 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 AGAP9Q5VTM2 703 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 LPCAT4Q643R3 524 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 TMEM215Q68D42 235 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 FAM45BPQ6NSW5 357 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 SFTPA1Q8IWL2 248 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 KIAA1958Q8N8K9 716 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 FAM45AQ8TCE6 357 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 SORCS1Q8WY21 1168 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 CDKN2AIPNLQ96HQ2 116 aa13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 GATA5Q9BWX5 397 aaPredicted RBP13.78□□□□□ -0.2
CSNK1E-201ENST00000359867 CXorf51AA0A1B0GTR3 108 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 CCDC162PA2VCL2 907 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 K7ERQ8 282 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 HSPA4LO95757 839 aa13.77□□□□□ -0.2
CSNK1E-201ENST00000359867 STK19P49842 368 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms