RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OR4Q2P0C623 313 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 BBS12Q6ZW61 710 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 GIPC3Q8TF64 312 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 EXOSC8Q96B26 276 aaKnown RBP18.29■□□□□ 0.52
SHANK1-202ENST00000359082 GMIPQ9P107 970 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 MRPS33Q9Y291 106 aaKnown RBP18.29■□□□□ 0.52
SHANK1-202ENST00000359082 MFHAS1Q9Y4C4 1052 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 KCNA5P22460 613 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 IGFBP5P24593 272 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 C2orf80Q0P641 193 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 DUSP4Q13115 394 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 SWI5Q1ZZU3 235 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 C6orf52Q5T4I8 152 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 KLHL32Q96NJ5 620 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 GRM5P41594 1212 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 SLC25A52Q3SY17 297 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 REP15Q6BDI9 236 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 MCEMP1Q8IX19 187 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 GPR65Q8IYL9 337 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 FAM47BQ8NA70 645 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 PCDHAC2Q9Y5I4 1007 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 MAP2K7O14733 419 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 DNASE1L1P49184 302 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 SEC13P55735 322 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 HOPXQ9BPY8 73 aaPredicted RBP18.28■□□□□ 0.52
SHANK1-202ENST00000359082 WDR12Q9GZL7 423 aaKnown RBP18.28■□□□□ 0.52
SHANK1-202ENST00000359082 AK5Q9Y6K8 562 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 CYP3A7-CYP3A51PA0A087WV96 503 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 SLC15A5A6NIM6 579 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 A8MUI8 341 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 TSPAN9O75954 239 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 BPGMP07738 259 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 CDH3P22223 829 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 CYP3A7P24462 503 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 ICAM3P32942 547 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 GLYATQ6IB77 296 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 CCDC80Q76M96 950 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 CPA6Q8N4T0 437 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 OR52J3Q8NH60 311 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 IL31RAQ8NI17 732 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 TWIST2Q8WVJ9 160 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 FAM84AQ96KN4 292 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 GOLGA2P5Q9HBQ8 144 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 BCKDKO14874 412 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 CAPN15O75808 1086 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 SLC30A6Q6NXT4 461 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 RASSF6Q6ZTQ3 369 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 OR4K2Q8NGD2 314 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 MCFD2Q8NI22 146 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 XAGE5Q8WWM1 108 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 GLOD4Q9HC38 313 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 EVLQ9UI08 416 aaPredicted RBP18.28■□□□□ 0.52
SHANK1-202ENST00000359082 TBC1D24Q9ULP9 559 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 TIMM22Q9Y584 194 aa18.28■□□□□ 0.52
SHANK1-202ENST00000359082 SIN3BO75182 1162 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 PEX6Q13608 980 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 SMU1Q2TAY7 513 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 CHST15Q7LFX5 561 aaPredicted RBP18.27■□□□□ 0.52
SHANK1-202ENST00000359082 TPK1Q9H3S4 243 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 MARCH7Q9H992 704 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 TMEM27Q9HBJ8 222 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 KCTD5Q9NXV2 234 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 RAPGEFL1Q9UHV5 662 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 DHX15O43143 795 aaKnown RBP18.27■□□□□ 0.52
SHANK1-202ENST00000359082 PRMT3O60678 531 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 MSCO60682 206 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 C22orf31O95567 290 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 GLUD1P00367 558 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 APODP05090 189 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 CORO1AP31146 461 aaKnown RBP18.27■□□□□ 0.52
SHANK1-202ENST00000359082 OR1D2P34982 312 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 MAP2K5Q13163 448 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 PPM1MQ96MI6 270 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 FAM210AQ96ND0 272 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 CHMP1AQ9HD42 196 aaPredicted RBP18.27■□□□□ 0.52
SHANK1-202ENST00000359082 ZNF446Q9NWS9 450 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 CHST10O43529 356 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 PTPN9P43378 593 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 BRMS1LQ5PSV4 323 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 LRRC55Q6ZSA7 311 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 CHST9Q7L1S5 443 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 CEP295NLQ96MC4 621 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 RWDD3Q9Y3V2 267 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 PCDHGB3Q9Y5G1 929 aa18.27■□□□□ 0.52
SHANK1-202ENST00000359082 MC1RQ01726 317 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 FBXO48Q5FWF7 155 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 LDLRAP1Q5SW96 308 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 LDB1Q86U70 411 aaPredicted RBP18.27■□□□□ 0.51
SHANK1-202ENST00000359082 CHST4Q8NCG5 386 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 FAM81AQ8TBF8 368 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 RELTQ969Z4 430 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 HAVCR1Q96D42 359 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 FAM105AQ9NUU6 356 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 DNAJC11Q9NVH1 559 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 STOML2Q9UJZ1 356 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 PLIN3O60664 434 aa18.27■□□□□ 0.51
SHANK1-202ENST00000359082 DBIP07108 87 aaKnown RBP18.27■□□□□ 0.51
SHANK1-202ENST00000359082 SULT2A1Q06520 285 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms