RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 LIN52Q52LA3 116 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 UNC50Q53HI1 259 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 TXNDC8Q6A555 127 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 RALGPS2Q86X27 583 aaPredicted RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 MFSD6LQ8IWD5 586 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 LSMEM2Q8N112 164 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 EEF1AKMT1Q8WVE0 214 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 PTERQ96BW5 349 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 C1QTNF1Q9BXJ1 281 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 NOL6Q9H6R4 1146 aaKnown RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 ZDHHC6Q9H6R6 413 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 ZFYVE1Q9HBF4 777 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 MRPL17Q9NRX2 175 aaKnown RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 ARL15Q9NXU5 204 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 ANKRD66B4E2M5 251 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 SLC22A2O15244 555 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 CDK14O94921 469 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 SLC25A14O95258 325 aaPredicted RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 MAP4P27816 1152 aaKnown RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 CHRNB3Q05901 458 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 DYNC1I2Q13409 638 aaKnown RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 POM121L1PQ3SYA9 428 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 ADAMTSL2Q86TH1 951 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 DDX53Q86TM3 631 aaKnown RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 ITIH5Q86UX2 942 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 TFB2MQ9H5Q4 396 aaKnown RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 COQ10BQ9H8M1 238 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 KANSL1LA0AUZ9 987 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 ALBP02768 609 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 NCK1P16333 377 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 SERPINA4P29622 427 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 CDKN1CP49918 316 aaPredicted RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 CRY1Q16526 586 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 TMTC4Q5T4D3 741 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 TAS1R1Q7RTX1 841 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 CPSF7Q8N684 471 aaKnown RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 RMND5BQ96G75 393 aaPredicted RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 SLC39A13Q96H72 371 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 TRAPPC9Q96Q05 1148 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 ELOVL6Q9H5J4 265 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 PARVBQ9HBI1 364 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 INTS10Q9NVR2 710 aaKnown RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 LEF1Q9UJU2 399 aaPredicted RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 SPO11Q9Y5K1 396 aa11.11□□□□□ -0.63
SSU72-202ENST00000359060 ZNF646O15015 1829 aaPredicted RBP11.11□□□□□ -0.63
SSU72-202ENST00000359060 LDB2O43679 373 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 LDLRP01130 860 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 CAPN1P07384 714 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 CD1DP15813 335 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 ATP6V1B2P21281 511 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 GKP32189 559 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 HALP42357 657 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 DIO3P55073 304 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 GRB7Q14451 532 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 OR4D1Q15615 310 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 PGS1Q32NB8 556 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 SYTL3Q4VX76 610 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 LRRC73Q5JTD7 316 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 LYSMD3Q7Z3D4 306 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 SCML4Q8N228 414 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 CLHC1Q8NHS4 586 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 MAGEE2Q8TD90 523 aaPredicted RBP11.1□□□□□ -0.63
SSU72-202ENST00000359060 CANT1Q8WVQ1 401 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 ZNF599Q96NL3 588 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 PSKH2Q96QS6 385 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 TCF12Q99081 682 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 CORO1BQ9BR76 489 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 CFAP97Q9P2B7 532 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 POLR3HQ9Y535 204 aaPredicted RBP11.1□□□□□ -0.63
SSU72-202ENST00000359060 TNPO3Q9Y5L0 923 aaKnown RBP11.1□□□□□ -0.63
SSU72-202ENST00000359060 LCTP09848 1927 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 PTPRFP10586 1907 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 ILVBLA1L0T0 632 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 CFAP99D6REC4 459 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 MUSKO15146 869 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 CLOCKO15516 846 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 ADAM12O43184 909 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 ALOX15P16050 662 aaPredicted RBP11.1□□□□□ -0.63
SSU72-202ENST00000359060 GJA1P17302 382 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 DGKAP23743 735 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 DNAJB1P25685 340 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 MAGEA12P43365 314 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 SH3BP2P78314 561 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 NRG1Q02297 640 aaPredicted RBP11.1□□□□□ -0.63
SSU72-202ENST00000359060 ILF2Q12905 390 aaKnown RBP11.1□□□□□ -0.63
SSU72-202ENST00000359060 PABPC1LQ4VXU2 614 aaKnown RBP11.1□□□□□ -0.63
SSU72-202ENST00000359060 DNAJB7Q7Z6W7 309 aaPredicted RBP11.1□□□□□ -0.63
SSU72-202ENST00000359060 CNTN4Q8IWV2 1026 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 ARRDC2Q8TBH0 407 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 YIPF1Q9Y548 306 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 EPOP01588 193 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 MZF1P28698 734 aaPredicted RBP11.1□□□□□ -0.63
SSU72-202ENST00000359060 CSKP41240 450 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 RING1Q06587 406 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 TXNDC11Q6PKC3 985 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 STK32CQ86UX6 486 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 SERPINA9Q86WD7 417 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 PGBD5Q8N414 524 aa11.1□□□□□ -0.63
SSU72-202ENST00000359060 OR2T34Q8NGX1 318 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms