RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 IL23AQ9NPF7 189 aa14.79□□□□□ -0.04
GABPB1-202ENST00000359031 ABCB8Q9NUT2 735 aa14.79□□□□□ -0.04
GABPB1-202ENST00000359031 UTP6Q9NYH9 597 aaKnown RBP14.79□□□□□ -0.04
GABPB1-202ENST00000359031 LAMA2P24043 3122 aaKnown RBP14.79□□□□□ -0.04
GABPB1-202ENST00000359031 MTCL1Q9Y4B5 1905 aaKnown RBP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 A0A0J9YYE9 177 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 A0A1W2PRU2 124 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 NPEPPSL1A6NEC2 478 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 E5RI56 91 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 K7ERQ8 282 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 LEFTY2O00292 366 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 AZIN1O14977 448 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 MAP3K7O43318 606 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 CLASP2O75122 1294 aaKnown RBP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 GPC4O75487 556 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 CDK14O94921 469 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 TSPAN12O95859 305 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 TRBC1P01850 177 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 CTPS1P17812 591 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 RPS3P23396 243 aaKnown RBP eCLIP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 EEF1DP29692 281 aaKnown RBP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 IL2P60568 153 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 IRX1P78414 480 aaPredicted RBP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 LCP2Q13094 533 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 ART3Q13508 389 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 PTK2BQ14289 1009 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 TSNQ15631 228 aaKnown RBP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 PLEKHG6Q3KR16 790 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 UGT3A2Q3SY77 523 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 ANKS6Q68DC2 871 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 CLEC6AQ6EIG7 209 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 LARP4Q71RC2 724 aaKnown RBP eCLIP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 TAS2R42Q7RTR8 314 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 SHKBP1Q8TBC3 707 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 CLP1Q92989 425 aaKnown RBP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 BHMTQ93088 406 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 FUBP1Q96AE4 644 aaKnown RBP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 CCDC124Q96CT7 223 aaKnown RBP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 EMILIN2Q9BXX0 1053 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 MID1IP1Q9NPA3 183 aa14.78□□□□□ -0.04
GABPB1-202ENST00000359031 EVLQ9UI08 416 aaPredicted RBP14.78□□□□□ -0.04
GABPB1-202ENST00000359031 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 CAPN8A6NHC0 703 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 CDC7O00311 574 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 BTN3A1O00481 513 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 PRMT5O14744 637 aaPredicted RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 SMAD6O43541 496 aaKnown RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 OR1I1O60431 355 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 SIX3O95343 332 aaPredicted RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 CXCL14O95715 111 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 FGF19O95750 216 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 ALPIP09923 528 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 DDX6P26196 483 aaKnown RBP eCLIP14.77□□□□□ -0.046e-6■■■■□ 19.3
GABPB1-202ENST00000359031 SERPINA4P29622 427 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 CDH13P55290 713 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 SH3BP2P78314 561 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 CDC16Q13042 620 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 STX5Q13190 355 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 FASTKQ14296 549 aaKnown RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 LYPLAL1Q5VWZ2 237 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 OTOP2Q7RTS6 562 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 EFL1Q7Z2Z2 1120 aaKnown RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 HPS6Q86YV9 775 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 CAMK1DQ8IU85 385 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 SIDT2Q8NBJ9 832 aaKnown RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 N4BP2L2Q92802 583 aaPredicted RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 LINGO1Q96FE5 620 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 GAS2L1Q99501 681 aaPredicted RBP14.77□□□□□ -0.04
GABPB1-202ENST00000359031 TTC1Q99614 292 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 WDR41Q9HAD4 459 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 ZFYVE1Q9HBF4 777 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 BCAP29Q9UHQ4 241 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 APPL1Q9UKG1 709 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 IKZF3Q9UKT9 509 aa14.77□□□□□ -0.04
GABPB1-202ENST00000359031 PSMD12O00232 456 aaPredicted RBP14.77□□□□□ -0.05
GABPB1-202ENST00000359031 VPS4BO75351 444 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 GLUD1P00367 558 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 CD1EP15812 388 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 TSPAN8P19075 237 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 ITGALP20701 1170 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 CD70P32970 193 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 STX1BP61266 288 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 CLCQ05315 142 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 PTPRRQ15256 657 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 PIGGQ5H8A4 983 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 TCHHL1Q5QJ38 904 aaPredicted RBP14.77□□□□□ -0.05
GABPB1-202ENST00000359031 CYHR1Q6ZMK1 362 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 GK5Q6ZS86 529 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 SNX20Q7Z614 316 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 KLHL23Q8NBE8 558 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 TTC16Q8NEE8 873 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 OR2AP1Q8NGE2 309 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 ZNF483Q8TF39 744 aaPredicted RBP14.77□□□□□ -0.05
GABPB1-202ENST00000359031 TWIST2Q8WVJ9 160 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 TIFAQ96CG3 184 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 EID2BQ96D98 161 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 PDLIM5Q96HC4 596 aaKnown RBP14.77□□□□□ -0.05
GABPB1-202ENST00000359031 LMLNQ96KR4 655 aa14.77□□□□□ -0.05
GABPB1-202ENST00000359031 TUBGCP5Q96RT8 1024 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms