RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SERPINB1P30740 379 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 SCNN1AP37088 669 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 TRPC1P48995 793 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 OR4D2P58180 307 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 TUBA4AP68366 448 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 CDC42EP1Q00587 391 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 CYP2A13Q16696 494 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 KIAA0319Q5VV43 1072 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 KCTD11Q693B1 232 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 CILP2Q8IUL8 1156 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 AQP12AQ8IXF9 295 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 OR56A4Q8NGH8 313 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 RORBQ92753 470 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 C6orf62Q9GZU0 229 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 RBM38Q9H0Z9 239 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 MUC3BQ9H195 1237 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 GSTO2Q9H4Y5 243 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 EPS8L2Q9H6S3 715 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 RPF2Q9H7B2 306 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 RASSF1Q9NS23 344 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ABCC13Q9NSE7 274 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 DDX28Q9NUL7 540 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ACTR3BQ9P1U1 418 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ADGRE2Q9UHX3 823 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 VPS28Q9UK41 221 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 CDH9Q9ULB4 789 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 TCRBV3S1A0A5B6 114 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 BBIP1A8MTZ0 92 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 GPR182O15218 404 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 SH3BP5O60239 455 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 BMP10O95393 424 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 GPIP06744 558 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 HAPLN1P10915 354 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 SLC6A2P23975 617 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 PRDX3P30048 256 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 RXRGP48443 463 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 PSEN2P49810 448 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 BMXP51813 675 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 SFSWAPQ12872 951 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 DDX39BQ13838 428 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 PAGE3Q5JUK9 113 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 SIRPB2Q5JXA9 342 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 GPRIN3Q6ZVF9 776 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 R3HCC1LQ7Z5L2 792 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 THAP5Q7Z6K1 395 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ANKRD46Q86W74 232 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 FUNDC1Q8IVP5 155 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 FBXO32Q969P5 355 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 FAM120BQ96EK7 910 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 LINGO1Q96FE5 620 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 SLC2A13Q96QE2 648 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 TINF2Q9BSI4 451 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 FEM1AQ9BSK4 669 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 NPLQ9BXD5 320 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 DPY30Q9C005 99 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ABHD16BQ9H3Z7 469 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 LTB4R2Q9NPC1 389 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 FAIMQ9NVQ4 179 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 TMEM181Q9P2C4 612 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 AASSQ9UDR5 926 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 KLQ9UEF7 1012 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 PADI4Q9UM07 663 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ST3GAL5Q9UNP4 418 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 INVSQ9Y283 1065 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 GMEB1Q9Y692 573 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 RBBP6Q7Z6E9 1792 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 QSER1Q2KHR3 1735 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 NUP214P35658 2090 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 FGF10O15520 208 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 MAFKO60675 156 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 SEC22BO75396 215 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 LRATO95237 230 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ANXA6P08133 673 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 HSMCR30P0CW71 290 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF37AP17032 561 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 AKT1P31749 480 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 GRK4P32298 578 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 THPOP40225 353 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 MAGEA12P43365 314 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 CCT8P50990 548 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 AIF1P55008 147 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 LCP2Q13094 533 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 OR4D1Q15615 310 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF829Q3KNS6 432 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 NHSL2Q5HYW2 709 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 INTS6LQ5JSJ4 861 aaKnown RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 TAPT1Q6NXT6 567 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ISCA2Q86U28 154 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ANKFN1Q8N957 763 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 ZMIZ2Q8NF64 920 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 C11orf84Q9BUA3 381 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 CINPQ9BW66 212 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-203ENST00000358528 GPR63Q9BZJ6 419 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 SLC25A51Q9H1U9 297 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 HMG20AQ9NP66 347 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 HPS4Q9NQG7 708 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 TMEM30AQ9NV96 361 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 GDAP2Q9NXN4 497 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 WWOXQ9NZC7 414 aa6.53□□□□□ -1.36
CSDE1-203ENST00000358528 COL11A2P13942 1736 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms