RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 PRAMEF11O60813 436 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 PRAMEF12O95522 483 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 HLA-DPA1P20036 260 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 UGT1A1P22309 533 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 UGT1A4P22310 534 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 FDXRP22570 491 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 PSMA4P25789 261 aaKnown RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 HOXC8P31273 242 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 UGT1A3P35503 534 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 UGT1A5P35504 534 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 ATP5C1P36542 298 aaKnown RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 CSRP3P50461 194 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 HK2P52789 917 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 ATN1P54259 1190 aaPredicted RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 IL1RL1Q01638 556 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 NR6A1Q15406 480 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 TMEM214Q6NUQ4 689 aaKnown RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 TMCO2Q7Z6W1 182 aaPredicted RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 DEFB128Q7Z7B8 93 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 SYVN1Q86TM6 617 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 LRRC49Q8IUZ0 686 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 PPP1R2P1Q96PQ5 205 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 MRM3Q9HC36 420 aaKnown RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 SYTL2Q9HCH5 934 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 SUCOQ9UBS9 1254 aaKnown RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 ANGPTL3Q9Y5C1 460 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 MAGED1Q9Y5V3 778 aaPredicted RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 COMMD3-BMI1R4GMX3 469 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 CCDC154A6NI56 674 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 K7ERQ8 282 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 HTRA2O43464 458 aaPredicted RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 ADAMTS4O75173 837 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 VPS26AO75436 327 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 OAZ2O95190 189 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 SLC7A1P30825 629 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 CORO1AP31146 461 aaKnown RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 POLD2P49005 469 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 SLC11A2P49281 568 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 HTR6P50406 440 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 CCL23P55773 120 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 TIAL1Q01085 375 aaKnown RBP eCLIP8.21□□□□□ -1.18e-7■■■■□ 21
CD46-205ENST00000358170 LIPEQ05469 1076 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 LCP2Q13094 533 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 PLD1Q13393 1074 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 TMED1Q13445 227 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 INPP5AQ14642 412 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 NEDD8Q15843 81 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 UGT3A2Q3SY77 523 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 LRRC73Q5JTD7 316 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 AFMIDQ63HM1 303 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 PTRHD1Q6GMV3 140 aaKnown RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 LPCAT2Q7L5N7 544 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 CLVS1Q8IUQ0 354 aaPredicted RBP8.21□□□□□ -1.1
CD46-205ENST00000358170 LINC01599Q8WXQ3 324 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 WBP2Q969T9 261 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 UROC1Q96N76 676 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 TLR9Q9NR96 1032 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 LATS2Q9NRM7 1088 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 RNF186Q9NXI6 227 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 SEPT3Q9UH03 358 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 VPS28Q9UK41 221 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 MYRFQ9Y2G1 1151 aa8.21□□□□□ -1.1
CD46-205ENST00000358170 SMIM31A0A1B0GVY4 71 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 LOC285095A0A1B0GVY8 99 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 EI24O14681 340 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 ARPC2O15144 300 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 TRIM24O15164 1050 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 SH3BGRLO75368 114 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 HSPA1AP0DMV8 641 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 HSPA1BP0DMV9 641 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 SLC6A2P23975 617 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 FASP25445 335 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 SLC11A1P49279 550 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 ACLYP53396 1101 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 DYNC1I2Q13409 638 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 GRM2Q14416 872 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 RFTN1Q14699 578 aaPredicted RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 PARP15Q460N3 678 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 ARMC12Q5T9G4 340 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 B3GNT6Q6ZMB0 384 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 PDZD8Q8NEN9 1154 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 CDC26Q8NHZ8 85 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 SCLYQ96I15 445 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 ATOH8Q96SQ7 321 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 TRMOQ9BU70 441 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 THUMPD3Q9BV44 507 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 MRPL40Q9NQ50 206 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 GID8Q9NWU2 228 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 RHBDL2Q9NX52 303 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 SLC30A1Q9Y6M5 507 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 KANSL1LA0AUZ9 987 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 SLC22A2O15244 555 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 INSIG1O15503 277 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 ACSL4O60488 711 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 RTN3O95197 1032 aaPredicted RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 PARNO95453 639 aaKnown RBP8.2□□□□□ -1.1
CD46-205ENST00000358170 C1RP00736 705 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 KLKB1P03952 638 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 CYBBP04839 570 aa8.2□□□□□ -1.1
CD46-205ENST00000358170 PYGLP06737 847 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms