RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 AIF1P55008 147 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.78□□□□□ -0.361e-13■■■■■ 65.9
SMC4-202ENST00000357388 RTL4Q6ZR62 310 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 C16orf59Q7L2K0 433 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 SPPL2CQ8IUH8 684 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 PARP8Q8N3A8 854 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 EFCAB3Q8N7B9 438 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 SPATA20Q8TB22 786 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 EPS8L1Q8TE68 723 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 HEXDCQ8WVB3 486 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 GAL3ST3Q96A11 431 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 RHOJQ9H4E5 214 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 CCDC177Q9NQR7 707 aaPredicted RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 hCG_1818297A0A087WSY0 165 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 ISPDA4D126 451 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 DDNO94850 711 aaPredicted RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 MVKQ03426 396 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 PLEKHG6Q3KR16 790 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 XKR6Q5GH73 641 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 ZNF697Q5TEC3 545 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 RAET1GQ6H3X3 334 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 TPGS1Q6ZTW0 290 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 CACUL1Q86Y37 369 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 MAP4K3Q8IVH8 894 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 SENP8Q96LD8 212 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 SCGB3A2Q96PL1 93 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 TKTL2Q9H0I9 626 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 TPK1Q9H3S4 243 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 PIH1D1Q9NWS0 290 aaKnown RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 RIIAD1A6NNX1 92 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 HDCP19113 662 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 CPTPQ5TA50 214 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 AHSA2Q719I0 299 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 ECHDC2Q86YB7 292 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 TMEM192Q8IY95 271 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 HJURPQ8NCD3 748 aaPredicted RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 CEP76Q8TAP6 659 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 IFT46Q9NQC8 304 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 ZNF510Q9Y2H8 683 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 GPSM3Q9Y4H4 160 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 TLL2Q9Y6L7 1015 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 TCRBV9S1A1TA0A576 114 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 KDM4BO94953 1096 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 CCNDBP1O95273 360 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 BDNFP23560 247 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 ECHS1P30084 290 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 GCNT6Q5T4J0 391 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 GPR65Q8IYL9 337 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 SPERTQ8NA61 448 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 TSEN15Q8WW01 171 aaKnown RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 SLC44A1Q8WWI5 657 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 GFM1Q96RP9 751 aaKnown RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 TTLL2Q9BWV7 592 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 AGXT2Q9BYV1 514 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 ZNF780BQ9Y6R6 833 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 LACTBL1A8MY62 500 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 F8VP50 259 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 ARCN1P48444 511 aaKnown RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 MAB21L1Q13394 359 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 TIGD2Q4W5G0 525 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 FAAH2Q6GMR7 532 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 GK5Q6ZS86 529 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 RASGEF1CQ8N431 466 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 CBR4Q8N4T8 237 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 MAB21L3Q8N8X9 362 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 HSFY1Q96LI6 401 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 KLHL5Q96PQ7 755 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 NMUR2Q9GZQ4 415 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 DENND2DQ9H6A0 471 aaPredicted RBP12.78□□□□□ -0.36
SMC4-202ENST00000357388 RIOX1Q9H6W3 641 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 MAT2BQ9NZL9 334 aa12.78□□□□□ -0.36
SMC4-202ENST00000357388 CACNB4O00305 520 aaPredicted RBP12.77□□□□□ -0.36
SMC4-202ENST00000357388 USP12O75317 370 aa12.77□□□□□ -0.36
SMC4-202ENST00000357388 ACSL1P33121 698 aa12.77□□□□□ -0.36
SMC4-202ENST00000357388 CEBPGP53567 150 aa12.77□□□□□ -0.36
SMC4-202ENST00000357388 NRG3P56975 720 aa12.77□□□□□ -0.36
SMC4-202ENST00000357388 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.36
SMC4-202ENST00000357388 ASB8Q9H765 288 aa12.77□□□□□ -0.36
SMC4-202ENST00000357388 KCNE2Q9Y6J6 123 aa12.77□□□□□ -0.36
SMC4-202ENST00000357388 CCRL2O00421 344 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 LYPLA1O75608 230 aaPredicted RBP12.77□□□□□ -0.37
SMC4-202ENST00000357388 AP1S1P61966 158 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 ADAM8P78325 824 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 FKBP1CQ5VVH2 108 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 REP15Q6BDI9 236 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 CCDC28AQ8IWP9 274 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 SRFBP1Q8NEF9 429 aaKnown RBP12.77□□□□□ -0.37
SMC4-202ENST00000357388 DMRTB1Q96MA1 342 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 AP1S3Q96PC3 154 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 MAU2Q9Y6X3 613 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 ALKQ9UM73 1620 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 FAM237AA0A1B0GTK4 181 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 GTPBP1O00178 669 aaKnown RBP12.77□□□□□ -0.37
SMC4-202ENST00000357388 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 FFAR3O14843 346 aa12.77□□□□□ -0.37
SMC4-202ENST00000357388 GPR42O15529 346 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms