RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TNIP2Q8NFZ5 429 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 ANGPTL6Q8NI99 470 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 SH3RF2Q8TEC5 729 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 HASPINQ8TF76 798 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZC3H15Q8WU90 426 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 NT5C3BQ969T7 300 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 RNF145Q96MT1 663 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 TMEM74Q96NL1 305 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 C16orf70Q9BSU1 422 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 NEK6Q9HC98 313 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 TBC1D13Q9NVG8 400 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 CD300AQ9UGN4 299 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 IPO11Q9UI26 975 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZNF229Q9UJW7 825 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 RLFQ13129 1914 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 MEIS3P2A8K0S8 358 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 HOXC11O43248 304 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 CNMDO75829 334 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 HLA-DQB2P05538 268 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 CAPN3P20807 821 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 OPRL1P41146 370 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 DIO3P55073 304 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 BFSP2Q13515 415 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 PTPRCAPQ14761 206 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 CARTPTQ16568 116 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 HECTD2Q5U5R9 776 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 ABRAXAS1Q6UWZ7 409 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 BTLAQ7Z6A9 289 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 TAC4Q86UU9 113 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 PTGR2Q8N8N7 351 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 TMEM40Q8WWA1 233 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 KLHL5Q96PQ7 755 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 CDK5RAP1Q96SZ6 601 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 SMOQ99835 787 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 MCMBPQ9BTE3 642 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 TRIM15Q9C019 465 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 GLOD4Q9HC38 313 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 NT5MQ9NPB1 228 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 SEMA4BQ9NPR2 832 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 CRTAC1Q9NQ79 661 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 KLQ9UEF7 1012 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 USP22Q9UPT9 525 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 TRIM64BA6NI03 449 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 UBXN8O00124 270 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 ARPC2O15144 300 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 FKBP9O95302 570 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 RBP1P09455 135 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 BMP2P12643 396 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 TGM1P22735 817 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 ELK4P28324 431 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZNF135P52742 658 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 SH3BP2P78314 561 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 NFE2Q16621 373 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 SLC51BQ86UW2 128 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 MIER2Q8N344 545 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 ANKFN1Q8N957 763 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 ARRDC4Q8NCT1 418 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 TOP1MTQ969P6 601 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 RMDN1Q96DB5 314 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 CCDC126Q96EE4 140 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 SLC2A13Q96QE2 648 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 VPS35Q96QK1 796 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 YME1L1Q96TA2 773 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 HBEGFQ99075 208 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 C9orf16Q9BUW7 83 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 SLC39A8Q9C0K1 460 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 NANOGQ9H9S0 305 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 CCM2LQ9NUG4 571 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 PKD2L2Q9NZM6 624 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 MAP10Q9P2G4 905 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 VWA7Q9Y334 891 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 KCTD3Q9Y597 815 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 DNAJC15Q9Y5T4 150 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 DGKBQ9Y6T7 804 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 UBA6A0AVT1 1052 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 ASB14A6NK59 587 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 HAT1O14929 419 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 KPNA6O60684 536 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 M6PRP20645 277 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 CCR1P32246 355 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 PNPLA4P41247 253 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 AFF1P51825 1210 aaKnown RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 CDKN2DP55273 166 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 WNT3AP56704 352 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 YWHAHQ04917 246 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 PPP1R8Q12972 351 aaKnown RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 SLX4IPQ5VYV7 408 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 DENND5AQ6IQ26 1287 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 UGT3A1Q6NUS8 523 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 CLEC4FQ8N1N0 589 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 PARP8Q8N3A8 854 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 C2CD4AQ8NCU7 369 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 TWIST2Q8WVJ9 160 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 ESAMQ96AP7 390 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 SH3YL1Q96HL8 342 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 SENP8Q96LD8 212 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 KCTD14Q9BQ13 255 aaPredicted RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 DGCR6LQ9BY27 220 aa8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 WDR12Q9GZL7 423 aaKnown RBP8.19□□□□□ -1.1
CDC42SE1-201ENST00000357235 GSTO2Q9H4Y5 243 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms