RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 USP45Q70EL2 814 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 UBE2Q1Q7Z7E8 422 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 DNAJA4Q8WW22 397 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 UFD1Q92890 307 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 KCTD7Q96MP8 289 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 VPS35Q96QK1 796 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 BBS4Q96RK4 519 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF214Q9UL59 606 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 UGT2B17O75795 530 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PRR5P85299 388 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 C2orf80Q0P641 193 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 LAPTM5Q13571 262 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 TMEM143Q96AN5 459 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 TMEM260Q9NX78 707 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 MRPS33Q9Y291 106 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SCN5AQ14524 2016 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 OTOGLQ3ZCN5 2332 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SCGNO76038 276 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 OAZ2O95190 189 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 FABP3P05413 133 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 MERTKQ12866 999 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 CHERPQ8IWX8 916 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 CCDC32Q9BV29 185 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 FN3KQ9H479 309 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ARL15Q9NXU5 204 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF219Q9P2Y4 722 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 DIP2BQ9P265 1576 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 M0R233 179 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PER2O15055 1255 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 AKR1D1P51857 326 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ADAM8P78325 824 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 KCTD19Q17RG1 926 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 IQCCQ4KMZ1 466 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 GALNT13Q8IUC8 556 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 UBR7Q8N806 425 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 CDH7Q9ULB5 785 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 RUVBL1Q9Y265 456 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 FAM205CA6NFA0 338 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 EIF4E1BA6NMX2 242 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SULT1B1O43704 296 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SLC37A4O43826 429 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ABL2P42684 1182 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 LLGL2Q6P1M3 1020 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 TAF8Q7Z7C8 310 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 GPRC5AQ8NFJ5 357 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 GEMIN6Q8WXD5 167 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 DNAJC19Q96DA6 116 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 CNDP2Q96KP4 475 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 CADM1Q9BY67 442 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 DNAJA1P31689 397 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 MNDAP41218 407 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 SLC1A2P43004 574 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 NCCRP1Q6ZVX7 275 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PRMT6Q96LA8 375 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 UROC1Q96N76 676 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 EXD2Q9NVH0 621 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 MDC1Q14676 2089 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TPD52L2O43399 206 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ESR1P03372 595 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF806P0C7X5 589 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PGS1Q32NB8 556 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 KHDC1Q4VXA5 237 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 GPR107Q5VW38 600 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 CYP2R1Q6VVX0 501 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TOP6BLQ8N6T0 577 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 BPIFB6Q8NFQ5 453 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TCEAL3Q969E4 200 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 FEM1CQ96JP0 617 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 BTF3L4Q96K17 158 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 RNF157Q96PX1 679 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 CLCC1Q96S66 551 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 DHRS7Q9Y394 339 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 GTF3C1Q12789 2109 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ATG2BQ96BY7 2078 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 CLRN2A0PK11 232 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 E7ENX8 843 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 UGT2B4P06133 528 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 BMP6P22004 513 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 MBTD1Q05BQ5 628 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 SWI5Q1ZZU3 235 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 RPTNQ6XPR3 784 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ERMP1Q7Z2K6 904 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 OXR1Q8N573 874 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 OR5K1Q8NHB7 308 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PRKYO43930 277 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PRKAR2AP13861 404 aaKnown RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ITGA7Q13683 1181 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ZNHIT3Q15649 155 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF772Q68DY9 489 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-202ENST00000357162 B3GALNT2Q8NCR0 500 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 AP2M1Q96CW1 435 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 PSKH2Q96QS6 385 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 CLCA2Q9UQC9 943 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ERVW-1Q9UQF0 538 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 LTN1O94822 1766 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 A0A1B0GVC2 190 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 TBX10O75333 385 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF432O94892 652 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 FAM131AQ6UXB0 335 aa6.53□□□□□ -1.36
VPS13B-202ENST00000357162 BEND5Q7L4P6 421 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms