RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 PAFAH1B1P43034 410 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 GRK6P43250 576 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 MAGEA6P43360 314 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CHRNA4P43681 627 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 GPR1P46091 355 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 LMAN1P49257 510 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 ZNF140P52738 457 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PCBP4P57723 403 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 HNRNPKP61978 463 aaKnown RBP eCLIP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CDK3Q00526 305 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CDK16Q00536 496 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 EIF2B5Q13144 721 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 LAMB3Q13751 1172 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PDE1CQ14123 709 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 INPP5AQ14642 412 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PUM1Q14671 1186 aaKnown RBP eCLIP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SHBQ15464 509 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 UAP1L1Q3KQV9 507 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 FAM182AQ5T1J6 154 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 DENND2CQ68D51 928 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 DENND5AQ6IQ26 1287 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TTC27Q6P3X3 843 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PPP1R21Q6ZMI0 780 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 Q6ZVL8 140 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SYDE1Q6ZW31 735 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CHSY3Q70JA7 882 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 GSTA5Q7RTV2 222 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 HEATR4Q86WZ0 1026 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 NAXDQ8IW45 347 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 C17orf53Q8N3J3 647 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 FSTL5Q8N475 847 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PLA2G15Q8NCC3 412 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 OR2I1PQ8NGU4 316 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 BAHD1Q8TBE0 780 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 BLOC1S5Q8TDH9 187 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SCG3Q8WXD2 468 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SLCO2A1Q92959 643 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 FUBP1Q96AE4 644 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TRIM44Q96DX7 344 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 COX14Q96I36 57 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 HSH2DQ96JZ2 352 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 RANBP9Q96S59 729 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 ZSCAN5AQ9BUG6 496 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SLC32A1Q9H598 525 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 IL21RQ9HBE5 538 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SMARCAL1Q9NZC9 954 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SPASTQ9UBP0 616 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 RIMKLBQ9ULI2 386 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PKP3Q9Y446 797 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CSNK1G3Q9Y6M4 447 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 GPR179Q6PRD1 2367 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 C2orf81A6NN90 581 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 E7EVH7 732 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 ZNF185O15231 689 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 FANCGO15287 622 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 STX7O15400 261 aaKnown RBP3.94□□□□□ -1.78
CNOT4-202ENST00000356162 ECEL1O95672 775 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 CRTAMO95727 393 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 KRT14P02533 472 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 CSF2P04141 144 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 PIRTP0C851 137 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 ALPPL2P10696 532 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 ETS1P14921 441 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 BPIP17213 487 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 LPOP22079 712 aaPredicted RBP3.94□□□□□ -1.78
CNOT4-202ENST00000356162 PSMA3P25788 255 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 HMGCLP35914 325 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 KCNJ1P48048 391 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 BLKP51451 505 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 SRP54P61011 504 aaKnown RBP3.94□□□□□ -1.78
CNOT4-202ENST00000356162 BASP1P80723 227 aaKnown RBP3.94□□□□□ -1.78
CNOT4-202ENST00000356162 CKAP4Q07065 602 aaKnown RBP3.94□□□□□ -1.78
CNOT4-202ENST00000356162 CDH17Q12864 832 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 PTK6Q13882 451 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 KCNJ11Q14654 390 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 PTPRRQ15256 657 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 ALG11Q2TAA5 492 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 TPRG1LQ5T0D9 272 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 CCDC137Q6PK04 289 aaKnown RBP3.94□□□□□ -1.78
CNOT4-202ENST00000356162 DBX2Q6ZNG2 339 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 RFLNAQ6ZTI6 216 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 KDELC2Q7Z4H8 507 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 CREG2Q8IUH2 290 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 PHYKPLQ8IUZ5 450 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 ANKMY2Q8IV38 441 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 SDR16C5Q8N3Y7 309 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 GLIS1Q8NBF1 620 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 ZNF548Q8NEK5 533 aaPredicted RBP3.94□□□□□ -1.78
CNOT4-202ENST00000356162 OR56A4Q8NGH8 313 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 BRSK1Q8TDC3 778 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 SAP25Q8TEE9 199 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 ULK4Q96C45 1275 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 HIC2Q96JB3 615 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 CAPZA3Q96KX2 299 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 VPS35Q96QK1 796 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 CDC6Q99741 560 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 MDFIQ99750 246 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 APOL2Q9BQE5 337 aa3.94□□□□□ -1.78
CNOT4-202ENST00000356162 RIOK2Q9BVS4 552 aaKnown RBP3.94□□□□□ -1.78
CNOT4-202ENST00000356162 SPATA16Q9BXB7 569 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms